Microbulbifer bruguierae: PVT68_05310
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Entry
PVT68_05310 CDS
T09733
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbrg
Microbulbifer bruguierae
Pathway
mbrg03030
DNA replication
mbrg03430
Mismatch repair
mbrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVT68_05310 (dnaE)
03430 Mismatch repair
PVT68_05310 (dnaE)
03440 Homologous recombination
PVT68_05310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbrg03032
]
PVT68_05310 (dnaE)
03400 DNA repair and recombination proteins [BR:
mbrg03400
]
PVT68_05310 (dnaE)
Enzymes [BR:
mbrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVT68_05310 (dnaE)
DNA replication proteins [BR:
mbrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVT68_05310 (dnaE)
DNA repair and recombination proteins [BR:
mbrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVT68_05310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WGL17713
LinkDB
All DBs
Position
complement(1250634..1254164)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTQPFVHLRIHSEYSLIDGLVRIKPLIGRLAELEMPAAAITDQTNFYAQVKFYKACLGAG
IKPITGADFWLREGGEEQPTLLTLYALNGTGYRNITELISRAWMEGQYHGHAYIQREWVK
EYAEGVLMLSGAKYGDVGRALIAGRTAQAEVLANEWASIFPDRYYLELQRTGRQGDEDYL
HSAVKLAGQLNLPVVATNDVRFLEDSEFEAHEVRVCIREGRALDDPRRERRYSSEQYLRT
PEEMQELFKDIPEALENTVEIARRCSSPIQLGKYFLPQFPIPEGMTENEFFEKVSFDGLY
ERLETILDKSAPDYEARKKEYEDRLRFELDIVIQMGFPGYFLIVMDFIQWAKDHNIPVGP
GRGSGAGSLIAYSQKITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEKRDRVINYVAE
NYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPADVGMTLQKAFEQEEI
LREFLENDEEGQEIWEMALQLEGVARNVGKHAGGVVIAPTKLTDFAPLYCDETGAGLVTQ
FDKNDVEDAGLVKFDFLGLRTLTIIDWAKVMVDEQRAREGKEPLVIEALPLDDVETFKLI
KRAETTAVFQLESRGMKDLIKRLQPDNLEDMIALVALFRPGPLQSGMVDDFINRKHGRAQ
VAYPDAKYQHEKLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEEGAKSEGVDPELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPA
QFMAATMSSDMDKTDKVVTFIEECRAMKLDLVPPDVNLGNYQFSVPVSDNGDNRIIYGLG
AIKGLGEGPIENIISERQKNGPFKDLFDFCSRVDPRKVNKRALEALVRSGALDSIGPDTS
SADGLDYSRAVLFNALDEAVKSAEQQSKNDSAGMMDLFGEVVRSASDGDVYEDFRKARPW
SIRERLEGEKNTLGLYLTGHPIDEYEEELKHLVKARIADLKPGRDNQKVAGLVVGMRVMK
TKRGDSMAIVTLDDRSARIEAAVFSEAFGEHREKLVKDSLLVLEGSISHDDYSGGLKMSV
NSVSTLDDLRSGSVIGVTLKVDCAQAMPKLGQRLSSCLRPYVGGSCPVHVEVERSDARGT
FRLPDEWKVEPNDQLIQSLREVVGRERVQLNYTSRQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccttcgtacatctaagaatccactccgaatattccctgatcgatggcctg
gtgcgtatcaagcccctgatcggtcgtctggctgagctggaaatgcccgcggcggcgatt
acggaccagaccaacttctacgcgcaggtgaagttttacaaagcctgcctcggagctggg
atcaagccaattaccggtgcggatttctggttgcgtgagggtggggaagagcagccgacg
ctgctgacgctgtacgcactcaacggtacagggtatcgcaatatcaccgagctgatctcc
cgtgcctggatggaagggcagtaccacgggcacgcgtatatccagcgcgaatgggtgaaa
gagtacgcggaaggtgtgttgatgctctccggcgccaagtacggcgatgtggggcgtgcg
ctgattgccgggcgtaccgcgcaggcggaagttctggcgaatgagtgggcgagtattttt
ccggaccgttattatctggagttgcagcggactgggcgccagggcgatgaagattacctg
cattcggcggtgaaactggctggccagctcaacctgcccgtggtcgccaccaatgatgtg
cgcttcctcgaagacagcgagtttgaagcccacgaagtgcgcgtgtgtatccgcgagggc
cgcgcgctggatgatccccgtcgcgagcgccgttattcttccgagcagtatctgcgtaca
ccggaagaaatgcaggagctgttcaaggatattccggaagctctggaaaatacggtagaa
attgcccgccgctgttcctcgccgatccagctgggtaaatacttcctgccccagttcccg
attccggagggcatgacggagaacgagttcttcgaaaaagtttccttcgacggtctttac
gagcggttggagactattctcgataaatccgcgccggattatgaggcgcgcaaaaaagag
tacgaagatcgcctgcgtttcgagctggatattgttatccagatgggattccccggttac
ttccttatcgtgatggactttatccagtgggccaaggatcacaatattcccgttggccct
gggcgaggttccggtgccggctcgttgattgcctattcgcagaaaattaccgatttggat
ccgctgcagtatgacctgctgttcgaacgatttctaaacccggaacgggtttccatgccc
gactttgatgttgacttctgtatggagaagcgcgaccgggtaattaactacgttgcggaa
aactacggccgcaacgcggtaagtcagatcatcaccttcggtaccatggcggcgaaggcg
gtggtacgggacgttgcacgggtacagggtaagtcgtacggccttgccgacaaactgtcg
aaaatgattcccgccgacgtgggcatgaccctgcagaaagccttcgaacaggaagagata
ctgcgcgaattcctggagaatgacgaagaaggccaggaaatctgggagatggccctgcag
ctggaaggtgttgcccgtaacgtgggtaagcacgccggtggtgtggttattgcgcccacc
aaactcaccgacttcgcaccgctgtactgcgacgaaaccggtgcgggcctggttacccag
ttcgacaagaacgacgtggaagatgcgggcctggtgaagttcgacttccttggcctgcgt
actctgaccatcattgactgggccaaggtaatggtggacgaacagcgcgcacgggaaggc
aaagagccgctcgtgattgaagcgctgccgctggacgatgtggaaaccttcaagctgatc
aagcgcgcagagaccaccgcggtattccagcttgaatcccgtggtatgaaggacctgatc
aagcgcctgcagccggacaacctggaggatatgatcgccctggtggccctgttccgcccg
ggtccgctgcagtcgggcatggtggacgactttatcaaccggaagcacggtcgcgcccag
gtcgcctatccggatgccaagtatcagcacgaaaaactgaaacccattctcgaacccacc
tacggcgttatcgtttaccaggaacaggtaatgcagatcgcccaggaacttgccggttat
accctcggcggcgcggatatgctgcgccgggccatgggtaagaaaaagcccgaggagatg
gccaagcagcgcagcactttcgaagagggcgctaagtctgagggtgtcgatcccgagctg
gcgatgaagatcttcgatctggtggagaagttcgccggttacggcttcaacaaatcccac
tccgccgcgtacgcactggtgtcttaccagaccgcctggctgaaagcgcactatccggcg
cagtttatggccgcgaccatgtcgtcggacatggacaagacggataaggtggtgacgttc
atcgaagaatgccgggcgatgaaactggacctggtgccgccggatgtgaacctcggcaac
taccagttctccgttcctgtttccgacaatggcgacaaccgcatcatctacggcctcggc
gccatcaaggggctgggtgaaggcccgatcgaaaacatcatcagcgaacggcagaaaaac
gggccgttcaaagacctgttcgatttctgctcccgcgttgacccgcgcaaggtcaataag
cgtgcactggaggcgctggtgcgctccggtgccctcgacagcatcggcccggatacatcc
agtgccgacggcctggattattcccgcgcggtgctgttcaacgcgctggacgaagcggtg
aaatccgcggagcagcagagcaagaacgacagcgccggcatgatggacctgttcggcgaa
gtggtgcgctccgcttccgatggcgatgtctatgaagacttccgcaaggcgcgtccgtgg
agtatccgcgagcgcctggagggcgagaaaaatactcttggtttgtatcttaccgggcac
cctatcgatgagtacgaggaagaactcaagcacctggtgaaggcgcgcattgccgacctg
aagcccgggcgcgacaaccagaaagttgccggcctggtggtgggcatgcgagtgatgaag
accaagcgtggtgattccatggccattgtcaccctggacgaccgcagcgcacgaatcgag
gcggcggtgttcagcgaggccttcggggagcaccgggagaagctggttaaagactcgctg
ctggtgctggagggctccatctctcatgacgattacagtggcggcttgaaaatgagtgtc
aacagcgtgtcgacgctggatgacttgcgcagtggcagcgtgattggggtaaccctcaag
gttgattgtgcccaggcgatgccgaagctcggccaacgcctgagcagttgtctgcgcccc
tatgtggggggcagttgcccggttcacgtggaagtggaacgcagcgatgcccgcggtacc
ttccgcttgcccgacgagtggaaagtggaaccaaacgaccagctgatccagtccctgcgg
gaagtggtgggcagggagagggtgcagctcaactacacttctcggcaatga
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