Microbulbifer bruguierae: PVT68_05330
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Entry
PVT68_05330 CDS
T09733
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mbrg
Microbulbifer bruguierae
Pathway
mbrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVT68_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbrg03000
]
PVT68_05330
03400 DNA repair and recombination proteins [BR:
mbrg03400
]
PVT68_05330
Enzymes [BR:
mbrg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PVT68_05330
Transcription factors [BR:
mbrg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PVT68_05330
DNA repair and recombination proteins [BR:
mbrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVT68_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
OGG_N
HTH_25
Rrf2
Motif
Other DBs
NCBI-ProteinID:
WGL17717
LinkDB
All DBs
Position
complement(1255708..1257198)
Genome browser
AA seq
496 aa
AA seq
DB search
MQPDPVICHSARLARDRRFDGRFYTAVKTTGIFCRPVCPARPPLEKNVEYFVTAAEAAAA
GYRPCLRCRPDAAPGSPAWGLVSTTVKRALSLMRAEREAQSIEQLAERLGITSRYLRKLF
AEHIGLSPLEVWQTERALFAFSLLRDTSLPIAEIAFAAGFNSLRRFNGVFKSIYQRTPTE
VRRESATDNGPGERARPIQIYLSYRPPFDWPALLAFFAARTLPGVEQVIAGESPEQGKYL
RSFQLLGQRGVLCVAHEPDRGRLRVSVHGDGCGAVLYPLREKLRRLFDLDADSEEIREHL
QVDPLLKQVLRVSPGVRLPGAWDPFEYTLRAILGQQISVAAATTIAGRVASRYGETFNGP
EGEALLLFPTAEQLRGADFSDIGVTRARAKTLQTFVTAALSGEVDFSEPDLETFCAQMTA
LPGIGDWTAHYTAMRGLSMPDAFPASDLGILIALGDGERKATPRQALARAEAWRPWRAYG
ALLLWQSLKLDTKKGE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgcagccagatccagtcatttgtcacagcgcccgcctcgccagggacaggcgcttcgac
ggtcgcttctacaccgcggtaaagactacggggattttttgtcgccctgtatgcccggcg
cgtccgccgctggaaaagaatgtggaatatttcgtgaccgctgcagaagctgccgccgcg
ggctatcggccgtgcctgcgttgtcgcccggatgccgctcccggcagcccggcctggggg
ctggtatccactacggtgaaacgggccctgagcctgatgcgtgcggagcgcgaggcccaa
tccatcgaacagctggcagaacgcctgggtatcaccagccgctatctgcgcaaactcttt
gctgaacatattggcctgagtccgctggaggtctggcaaacggaacgggcgctgtttgcg
ttcagtctgttgcgggacaccagtctgccgattgcggagattgcgtttgcggcggggttt
aacagtctgcgccggtttaatggcgtgttcaaaagcatctatcagcgtactcccactgag
gtgcgtcgagagtctgccactgacaatggtccaggcgagcgcgccaggcctatccagatt
tacctgagttaccgtccacccttcgattggcccgcattgctcgcgtttttcgccgcgcgc
accctgcccggagtggagcaggtcattgccggggaaagcccggagcagggtaaatatctg
cgcagtttccagttgctcggccagcgcggagtgttgtgtgtggcccatgagccggacagg
gggcggttgcgggtcagtgtccatggcgatggttgtggtgcggtactgtatccgctgcgg
gagaaactgcggcggctgttcgacctggatgccgacagtgaggaaattcgcgagcacctg
caggtggatccgctgctgaaacaagtgttgagggtcagccccggtgtgcgcctgccgggg
gcctgggacccgttcgaatacacgttgcgggcaattctcgggcagcagatttcggttgca
gcggccaccaccatcgccggacgtgtggccagccgctatggcgaaaccttcaatgggcct
gaaggtgaggcgctgctgttattcccaaccgcagagcagctgcgaggtgcggatttctcg
gatattggcgtgacccgagcgcgagcaaagacgctgcagacatttgtcactgccgcgctc
agtggcgaggtcgatttcagtgagcctgatctggagactttctgcgcacagatgacggct
ctaccgggtatcggcgactggactgcgcattacaccgcgatgcgcgggctttccatgccc
gatgcgtttcctgcatcggatctcggcatcctgatcgctctcggcgatggcgaacgcaag
gcgacgcccaggcaggccctcgcccgtgcggaggcctggcgcccgtggcgggcctacggt
gcactgctgctgtggcagtcactcaaactggatacaaagaaaggggagtga
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