Microbulbifer bruguierae: PVT68_13495
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Entry
PVT68_13495 CDS
T09733
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mbrg
Microbulbifer bruguierae
Pathway
mbrg00040
Pentose and glucuronate interconversions
mbrg01100
Metabolic pathways
mbrg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PVT68_13495
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVT68_13495
Enzymes [BR:
mbrg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PVT68_13495
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WGL15781
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Position
3251760..3253586
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AA seq
608 aa
AA seq
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MQNSLRTMLALVLCAGLTACGGGGSSGGDNGGSSSSSGGSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSGSSSGSSSSSGSSSSSSGAGSIDGGFAGYDYNLVGGAGGLVYTVNNGAD
LQEKLDQAKDTNQPITIYIDGTITNFNTGTGTDIQIKDMDNVSLIGVGENGEFDGIGLNI
RRANNIIVQNLLFHEAWPGQEKDAISIEGDDDGSTTGHIWIDHCELYSSLNVDKDYYDGL
IDSKSGARYITLSYNYLHDSWKTSLHGHTENDTNPDTDRLVTFHHNRFENLESRVPLYRH
GKGHVYNNYYNNIHSTAINSRAGAEMLIEHNVFENTQNPIVSFYSDVIGYWNLNGNVFGT
GVTWTAGSGTDITAQSGESTSNYTVPYEYTLDPTDGLKEHILANAGIGKLDQSGLEIPDP
VTPEGEVPVEEEPILEDVALPYAENFASDTAGFFSSSYRDLTGAPGDGTPMYHKVTGTAE
IQSGALSLTGSRVSIGNSTPTVNTTGGDATNTGVFDLSGSWQLSFKVVSVAGDTAKNFQL
YVDNNTPSSGNSIWGGSSKFYQVLLSDLVEGQTYTAPGLSASSNSFVTLRTESGATVVVD
DLLIEATP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattccttgcgcacaatgctggcactggtgctctgcgctggtctcaccgcttgt
ggtggtggcggtagcagtggcggagacaacggtggttccagcagttcttctggtggctct
tccagcagctcgagtagctcgtcaagtagcagttcatccagttcgtcgagcagttcgtcc
agtagcagttccagttcatcgagcagctcgtccggctcatccagcggcagttccagttct
tccggcagttccagctccagttccggcgccggcagtattgatggcggctttgctggctac
gattacaacctcgtcggtggtgccggtggtcttgtgtacaccgtcaacaatggcgctgac
ctgcaggagaagctggaccaggccaaagataccaatcagccgatcaccatttatatcgat
ggcaccattaccaatttcaataccggaaccggcaccgatatccagatcaaggatatggac
aatgtgtcgctgatcggtgtgggggaaaacggcgagtttgatggtatcgggctgaatatt
cgccgcgccaacaacatcatcgtgcagaacctgctgttccacgaagcctggcccggtcag
gaaaaggatgcgatcagtatcgaaggtgatgacgacggctctaccaccggccatatctgg
attgaccactgcgaactctacagctcgttgaatgtggataaggactactacgacggcctg
atcgactccaagagtggtgcccgctacatcaccctgtcctataactatctccacgactcg
tggaaaacatccctgcatgggcacactgaaaacgacacgaatccggacacggaccggttg
gtgactttccaccacaaccgctttgaaaatctggaatcccgtgttcccctgtaccgccac
ggtaagggtcacgtgtacaacaactactacaacaatattcactccactgcgatcaactcc
cgcgccggtgcggagatgctgatcgagcacaacgtgttcgaaaatacccagaaccccatc
gtgtctttttattcggatgtgattggctactggaacctgaatggcaatgtgttcggcact
ggtgtgacctggacggccggaagcggcacggacattactgcgcaaagcggcgagtccacg
tccaattacaccgtaccttatgagtacaccctcgatcctaccgatggtctcaaggagcat
atccttgccaacgccggtatcggcaaactggatcagtcgggcctggaaattcccgatccg
gtgacgccggaaggtgaagtcccggtggaagaggagccgattctggaggacgtagcgctt
ccctatgcggaaaattttgccagtgatacggcaggtttcttcagcagcagctaccgggat
ctcaccggtgcgcccggtgatggcacgcccatgtaccacaaggtaacgggcactgcagaa
atccagagtggcgctctcagtctcaccggcagtcgcgtttccatcggcaacagcacgccc
accgtgaacaccaccggcggcgatgcgacaaataccggggttttcgatctgagcggatcc
tggcagctcagcttcaaggtggtgagtgtcgctggcgatacggcgaaaaacttccagctc
tacgtggataacaacacaccgtccagtggtaattccatctggggcggtagttccaagttt
taccaggtattgctgagtgaccttgtagagggacagacctataccgcgcctggcctctcc
gccagcagcaattcgtttgtcaccctgagaacggagagtggtgccaccgtggtggtggat
gatctcctgatcgaggcgacgccctga
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