Microbulbifer bruguierae: PVT68_15700
Help
Entry
PVT68_15700 CDS
T09733
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mbrg
Microbulbifer bruguierae
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbrg03009
]
PVT68_15700 (rlmD)
Enzymes [BR:
mbrg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PVT68_15700 (rlmD)
Ribosome biogenesis [BR:
mbrg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PVT68_15700 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
PCMT
RrnaAD
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
Cons_hypoth95
Methyltransf_11
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WGL16203
UniProt:
A0ABY8NFD3
LinkDB
All DBs
Position
complement(3806609..3808015)
Genome browser
AA seq
468 aa
AA seq
DB search
MPPRKSPPRFRQSPTAKPTASQSGKGQRSAQVPRGNPEITIERLSHEVRGIARHQGKTLF
VDNALPGEKVRIRYTASRAKFDEAVAIEILEPADNRRTPPCPYAETCGGCALQHMAPEAQ
IEAKQQILLEQLQRFARAEPQTLLPPLAGHPLGYRRKARLGVRYVKPKQGGKPQLVLGFR
EKGSNDLTDIEQCPVLPADFSALIPALRTVVETSEGRRSISHIEVAIGDDATALVIRHLQ
PLSERDRQHWLDFVQVHQLHLYLQGGDDTEKAWPATGPDRLVYELPAFGVKLQFHPQDFI
QVNLEINRLMVDRALELLDVQAEDRVLDLFCGLGNFTLPLATRAREVVGVEGLLALTERA
RENAEANALHNIQFQAADLTGDFTRSPWARGGFDKILLDPPRTGALEVVRNISHFNAARI
VYVSCNPATLARDAAELIQRGYRLSKAGVMDMFPHTTHVESIALFERQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgagaaagtctccccccagattccgtcaaagccccaccgctaaacccacggca
agccaatcaggcaaaggccaacgcagcgcccaggttccgcggggcaaccccgagatcacc
atcgagcgcctgagccatgaggtgcggggtatcgcccgacaccagggtaaaaccctgttt
gtggacaacgccctgccgggagaaaaagtcaggattcgctacaccgcgagccgtgcaaaa
tttgatgaggccgtggcgattgagattctcgaacccgccgacaaccgccgcacgcccccc
tgcccttacgcagaaacctgcggtggctgtgccctgcaacacatggcaccggaagcgcag
atcgaagccaagcaacagatcctgctggaacaattgcagcgcttcgcccgtgcggagccg
caaaccctgctgccaccgcttgccggtcatccgctcggctaccgccgcaaagcccgcctg
ggtgtgcgctacgtaaagccgaaacaaggcggcaaaccacagctggtactgggcttccgg
gaaaaaggatccaatgacctcaccgacatagaacagtgcccggtactgcctgcagatttt
tccgcactgatccccgccctgcgcaccgtcgtagaaaccagtgaggggcgtcgcagcatc
tcccatatcgaggtggccatcggcgacgatgccaccgcgctggtcattcgacacctgcaa
ccgctgtctgagcgtgaccgccagcactggctcgacttcgtccaggtccaccagttgcac
ctgtacctgcagggcggcgatgacaccgaaaaagcctggccggcaaccggtcccgaccgg
cttgtgtacgaactacccgccttcggcgtgaaattgcagtttcacccgcaagacttcatt
caggtcaacctcgagatcaaccgtctgatggtggaccgcgccctggaactgctcgatgta
caagcggaagaccgggtactcgacctgttctgtggcctcggcaacttcaccctgcccctg
gccacccgcgcccgcgaagtcgtcggcgtcgagggactgctggcactcaccgaaagggcg
cgggaaaatgccgaagccaacgcactgcacaacatccagttccaggccgccgacctcacc
ggcgacttcacccgcagtccctgggccagaggcggcttcgacaaaatcctgctggaccca
ccccgcaccggtgcgctcgaagtggtgcgcaacatcagccacttcaatgccgcgcgcatc
gtctacgtctcctgcaaccccgccaccctggcacgggatgccgcggaactaatccagcgc
ggataccgtcttagtaaggcaggcgtaatggacatgttcccccacaccacccatgtggag
tccatcgccctgtttgaacggcagtaa
DBGET
integrated database retrieval system
