Microbulbifer bruguierae: PVT68_16785
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Entry
PVT68_16785 CDS
T09733
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mbrg
Microbulbifer bruguierae
Pathway
mbrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVT68_16785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrg03019
]
PVT68_16785
03009 Ribosome biogenesis [BR:
mbrg03009
]
PVT68_16785
Enzymes [BR:
mbrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVT68_16785
Messenger RNA biogenesis [BR:
mbrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVT68_16785
Ribosome biogenesis [BR:
mbrg03009
]
Prokaryotic type
rRNA helicases
PVT68_16785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
YmjE
Motif
Other DBs
NCBI-ProteinID:
WGL16408
UniProt:
A0ABY8NC85
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All DBs
Position
4106139..4107896
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AA seq
585 aa
AA seq
DB search
MTDNSMPTGFDQLGLPTEILDAVTKLGYETPSPIQAMTIPSLLEGRDVLGQAQTGTGKTA
AFALPLLANLDLKSKRPQALVLAPTRELAIQVAEACQSYAANLKGFHVAPIYGGADYRGQ
IQQLKRGVQLIVGTPGRVMDHMRKGTLDLSNLKTLVLDEADEMLRMGFIDDVQWVLEQIP
EERQIALFSATMPREIARIARDHLRDPVDVKIKVKTETAETIRQRYWPVGGLHKMDALTR
ILEAEPVDATIIFVRTKNATVEIADKLAARGFASAALNGDMAQGMREQVIEKLKAGKLDI
VVATDVAARGLDVKRISHVINYDIPYDTEAYIHRIGRTGRAGREGDAILFVAPREQRMLR
TIERATKKPIERLDLPTAAAVNASRMEKFQQKITYTLAGRRDLAPFRDLVDQYLSANDVD
PLDVAAALAAMAQGDQPLLLDEREPAPRERKRRDSDDDFDSRKRNKREKREGFDKDSRKI
PGPDEGKERYRIEVGREHGVRPGSVVGAIANEVDLDSSYIGRIEIYPDYTTVDLPEGMPK
EIFTHLKKVRVNGRPMNITRFEEEAGTGSKPKFAPKKRKPKMPRD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaattcaatgccaactggttttgaccagctgggcctgcctactgaaattctc
gacgctgttaccaagctgggatacgaaactccgtctcccatccaggcgatgactattccg
tcactgctggaagggcgcgatgtactgggtcaggcgcaaaccggtaccggcaagaccgcg
gcctttgcgctgccgctgctggcgaacctggatctgaaaagcaagcgcccccaggcactg
gtactggcgccgactcgcgagctggccattcaggtggccgaggcctgccagtcttatgcc
gccaatctcaaaggctttcacgttgcacctatctatggcggtgctgactaccgcggccag
atccagcagctcaagcgcggcgtgcagctgatcgtgggtaccccgggccgggtgatggac
catatgcgcaagggcaccctggatctgtctaacctgaagactctggtgctggacgaagcc
gacgaaatgctgcgcatgggctttatcgatgacgtgcagtgggtgctggaacagattccg
gaagagcgccagattgccctcttctccgccaccatgccccgcgaaatcgcgcgtattgcc
cgcgatcacttgcgtgacccggtggacgtaaagatcaaggtcaaaaccgagaccgccgaa
accatccgccagcgttactggccggtgggtggtctgcacaagatggacgcactcacccgg
attctcgaagccgagccggtggacgccactatcattttcgtgcgcaccaaaaacgcgact
gtcgagattgccgacaagcttgccgcgcgcggtttcgccagcgctgccctgaacggggac
atggcgcaggggatgcgtgagcaggtgattgaaaagctcaaggcgggcaagctggatatc
gttgtggcgacggacgttgcggcgcgtggcctggatgtgaagcgtatcagtcacgtgatc
aactacgacattccctacgacaccgaagcctacatccaccgtattggccgtaccggtcgt
gccgggcgcgagggtgatgcgatcctgttcgtcgcaccccgcgagcagcgtatgctccgc
accatcgagcgcgccaccaagaagccgatcgagcgtctcgatctgccgacggcggctgcg
gtgaatgcttcccgtatggaaaaattccagcagaaaattacttacaccctggctggccgc
cgtgatctggcaccgttccgcgatctggtggatcagtacttgtctgctaacgatgtggac
cccctggatgtagctgccgctctggccgcgatggctcagggtgaccagccgttgctgctg
gacgagcgcgagcccgcgcctcgcgagcgcaagcgtcgcgattccgacgatgactttgat
agccgcaagcgcaacaagcgtgaaaagcgcgaagggttcgacaaggacagccgcaagatt
ccggggccggatgagggcaaggaacgttaccgcatcgaagtgggacgtgagcacggcgta
cgtccgggcagtgtggttggcgctatcgccaatgaggtggatctggatagctcctacatc
gggcgtatcgagatttatccggactacaccaccgtggatttgcctgaagggatgccgaag
gagattttcactcatctgaaaaaggtgcgagtgaatggccgtccgatgaatattacccgt
tttgaggaagaggctggaacgggcagcaagccgaagtttgctcctaaaaaacgcaagccg
aagatgccgcgggattga
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