Mycolicibacterium brumae: L2Z93_000601
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Entry
L2Z93_000601 CDS
T08531
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mbrm
Mycolicibacterium brumae
Pathway
mbrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L2Z93_000601
09124 Replication and repair
03420 Nucleotide excision repair
L2Z93_000601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrm03021
]
L2Z93_000601
03400 DNA repair and recombination proteins [BR:
mbrm03400
]
L2Z93_000601
Enzymes [BR:
mbrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L2Z93_000601
Transcription machinery [BR:
mbrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L2Z93_000601
DNA repair and recombination proteins [BR:
mbrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L2Z93_000601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UWW07580
LinkDB
All DBs
Position
complement(579484..581133)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEIDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVTYSRYPVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARLDDDTVMVHNSERGRIKQMLLKIGWPAEDLAGYVDGEAHAIELTPDGW
ELRDYQQLAVDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LLARTSLTEAEIGEYSGERKEIRPVTIATYQVITRRTKGVYKHLELFDSRDWGLIVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTENERMTYAIAEPEEKYKLCATAHTKIAVVRSILARHEGEQTLVIGAYLD
QLDELGTELDAPVIQGSTKNAEREELFDAFRRGEIKTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDADYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggcccgctgattgtgcagtccgacaagaccgtgctgctggagatcgaccat
gagcaggccggcgccgcgcgggcggcgatcgcgccgttcgccgagctggaacgcgcgccc
gagcacgtgcacacctaccggatcaccccgctcgcgctgtggaacgcccgcgctgccggg
catgacgccgagcaggtggtcgacgcgctggtcacctactcccggtacccggtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcccgctacgggcgcctgcagctggtcaag
caccccgcgcacggcctgacgctggtcagcctcgatcgcgcggtgctcgaggaggtgctg
cgcaacaagaagatcgctccgatgctcggcgcccgcctcgacgacgacaccgtgatggtg
cacaacagtgagcgcggccggatcaagcagatgctgctcaagatcggctggcccgccgag
gacctcgccggttacgtcgacggcgaggcgcatgccatcgaactgacgcccgatggctgg
gagctgcgggactaccagcagctggccgtcgactcgttctgggccggcgggtcgggcgtg
gtggtgctgccctgtggcgcgggcaagaccctggtcggcgcggcggcgatggccaaggcc
ggggcgacgacgctgatcctggtcaccaacaccgtcgccggtcggcagtggaagcgcgag
ctgctggcccgcacctcgctgaccgaggccgagatcggcgagtattccggcgagcgcaag
gagatccggcccgtcaccatcgccacctaccaggtgatcacccgtcgcaccaagggcgtc
tataagcatctggagctgttcgactcccgcgactggggcctgatcgtctacgacgaggtg
cacctgctgccggcgccggtgttccggatgaccgccgatctgcagtcgcgccggcggctc
ggcctgaccgccacgctgatccgcgaggacggccgcgagggcgacgtgttctcgctgatc
ggcccgaagcgctacgacgcgccgtggaaggacatcgaggcccagggctggatcgcgccg
gccgaatgcgtcgaggtgcgggtcaccatgaccgagaacgagcggatgacctacgcgatc
gccgagccggaggagaagtacaagctctgcgcgacggcgcacaccaagatcgcggtggtg
cgctccatcctggcccgccacgagggcgagcagaccctggtgatcggcgcctacctggac
cagctcgacgaactcggcacggaactcgacgccccggtgatccaggggtcgacgaagaac
gccgaacgcgaggagctgttcgacgcgttccgccgcggcgagatcaagaccctggtggtc
tccaaggtcgcgaacttctccatcgacctgccggaggcgtcggtcgcggtgcaggtgtcc
ggcaccttcggctcccgccaggaggaagcacagcggctgggccggctgctgcggcccaag
cacgacggcggcggcgcggtgttctacagcgtggtcagccgggattccctggacgccgac
tacgccgcgcaccggcagcgtttcctggccgagcagggctacggctacatcatccgcgac
gccgacgacctgctgggaccagccatctga
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