Mycolicibacterium brumae: L2Z93_002293
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Entry
L2Z93_002293 CDS
T08531
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mbrm
Mycolicibacterium brumae
Brite
KEGG Orthology (KO) [BR:
mbrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbrm03016
]
L2Z93_002293
Enzymes [BR:
mbrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L2Z93_002293
Transfer RNA biogenesis [BR:
mbrm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L2Z93_002293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UWW09200
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All DBs
Position
2377319..2378566
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AA seq
415 aa
AA seq
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MTASEPGTDPEPEAGPEPQPLAVPADGVPAVSVYAEDIAAAAELLDSGHGAFAIDAERAS
GFRYSNRAYLIQIRRAGAGTVLIDPVSHGRDPLQTLAPVAKVLDEGEWILHAADQDLPCL
AELGLRPPALYDTELAGRLAGYDRVNLAAMVARLLGLGLAKGHGAADWSKRPLPAAWLNY
AALDVEVLLELRDAIANVLAEQGKTDWAAQEFEYLRTAEPTVTRRDRWRRTSGIHKVKNR
QALAEVRQLWTVRDQIAARRDIAPGRILPDSAIVAAALADPKTVDELTALPVFGGPKQRR
QANTWLQAIAAGRADTDPPQLSERQPGPPPAVRWSRRKPEASARLEAARSALTALSDQVG
VPTENLVSPELVRRLCWDWTPDGPAQPRIEAFLAENGARPWQRELVGPVLAGALG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttccgaacccgggaccgatcccgaaccagaagccggaccggagcctcaacct
ctcgccgtcccggccgacggggtgcccgcggtgtcggtgtacgccgaggacatcgccgcc
gcggccgaactgctggattccgggcacggcgcgttcgcgatcgacgccgaacgcgcgtcg
ggcttccgctactccaaccgcgcgtatctgatccagatccgccgggccggcgccggcacc
gtgctgatcgacccggtcagccacggccgcgacccgctgcaaaccctcgccccggtcgcc
aaggtgctcgacgagggcgagtggatcctgcacgccgccgatcaggacctgccgtgcctc
gccgagctcgggctgcgaccaccggcgctgtatgacaccgagctggccgggcgcctcgcc
ggctacgaccgggtgaacctggccgccatggtcgcccggctgctggggctgggcctggcc
aagggccacggcgcggcggactggtccaaacggccgctgcccgccgcctggctgaactac
gcggcgctggacgtcgaggtgctattggagctgcgcgacgcgatcgcgaacgtgctggcc
gagcagggcaaaaccgattgggccgcacaggaattcgagtatctgcgcaccgccgagccg
accgtcacccggcgggaccgctggcggcggacctccgggatccacaaggtgaagaatcgc
caagccctcgccgaggtccgccagctgtggacggtgcgcgaccagatcgccgcccgccgg
gacatcgcgccgggccggatcctgccggactcggcgatcgtggcggcggctctggccgac
cccaagaccgtcgacgagctgaccgcgctgccggtgttcggcggccccaaacagcgccgc
caggcgaacacctggctgcaggccatcgccgccggccgcgccgacaccgatcccccgcaa
ctgtccgagcgtcagcccggcccaccgcccgcggtccgctggagtcgccgcaaacccgag
gcctcggcccggctggaggccgcccggtccgcgttgaccgcgctgtccgatcaggtcggg
gtgccaacggagaacctggtgtccccggaactggtgcgcaggctgtgctgggactggacg
cccgacgggccggcgcagccgcggatcgaggcgttcttagccgagaacggggcccggccg
tggcagcgcgagctggtcgggccggtgctggccggcgcgctgggctga
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