Mycolicibacterium brumae: L2Z93_002404
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Entry
L2Z93_002404 CDS
T08531
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mbrm
Mycolicibacterium brumae
Pathway
mbrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Z93_002404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrm03019
]
L2Z93_002404
03016 Transfer RNA biogenesis [BR:
mbrm03016
]
L2Z93_002404
Enzymes [BR:
mbrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L2Z93_002404
Messenger RNA biogenesis [BR:
mbrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L2Z93_002404
Transfer RNA biogenesis [BR:
mbrm03016
]
Prokaryotic type
tRNA degradation factors
L2Z93_002404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
PKD_3
KH_KhpA-B
KH_5
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UWW09308
LinkDB
All DBs
Position
complement(2484362..2486578)
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AA seq
738 aa
AA seq
DB search
MSVAQIDEGVFESTAVIDNGSFGARTIRFETGRLARQAAGSVVAYLDDETMLLSATTASK
QPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR
NEIQVVVTVQSLDPNDLYDVLAINAASASTQLSGLPFSGPVGGVRVALIGDQWVAFPTVE
QLEGAVFDMVVAGRVVGDDVAIMMVEAEATDNVIELIAGGATAPTETVVAEGLEAAKPFI
KVLCEAQAGLAEAAGKETAEFPLFPDYAPDAFDAVAGVATDALSEAMSIGDKAAREARTD
EIKADVLAQLGESFEGREKELGAAFRSLTKKLVRQRILTDHFRIDGRGVTDIRALSAEVA
IIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGR
VGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLSMLN
AGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGTKDFVTALQLD
TKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDAPDEMSPYAPRITTIKVPVDKIGEVI
GPKGKMINSITEETGAQISIEDDGTVFVGAADGPSAQAAIDKINAIANPQLPKVGERFLG
TVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVAKVGDKLRVEIADIDNRGKIS
LILVDEDAAPADAAPADA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgcacaaatcgacgaaggcgttttcgaatccaccgccgtcatcgacaacggg
agcttcggcgcccgcaccattcgtttcgagaccggccggctggcccgccaggccgccggt
tccgtcgtcgcctacctcgacgacgagaccatgctgctctccgccaccacggccagcaag
cagcccaaggaacatttcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtac
gccgccgggcgcatcccgggctcgttcttccgccgcgagggccggccgtccaccgacgcc
atcctgacctgccgcctgatcgaccggccgctgcgcccgtcgttcgtctccggcctgcgc
aacgagatccaggtcgtcgtcaccgtccagagcctggatcccaacgacctctacgacgtg
ctggccatcaacgccgcctcggcgtccactcagctctccggcctgccgttctccggcccg
gtcggcggcgtgcgcgtcgcgctgatcggtgaccagtgggtcgcgttcccgaccgtcgag
cagctcgagggcgccgtgttcgacatggtcgtcgccggtcgcgtcgtgggtgatgacgtc
gcgatcatgatggtcgaggccgaggccaccgacaacgtcatcgagctgatcgccggtggg
gccaccgcaccgaccgagactgtcgtcgccgagggcctggaggccgccaagccgttcatc
aaggtgctgtgtgaggcccaggccggtctggccgaggccgccggcaaggagaccgcggag
ttcccgctgttcccggactacgcccccgacgccttcgacgccgtcgcaggcgtggccact
gacgccctgtcggaggccatgagcatcggcgacaaggccgcccgcgaggcccgcaccgac
gagatcaaggccgacgtgctggcccagctcggcgaatccttcgagggccgcgagaaggaa
ctcggcgccgcgttccggtcgctgaccaagaagctggtccgccagcgcatcctgaccgac
cacttccgcatcgacggccgcggcgtcaccgacatccgcgcgctgtcggccgaggtcgcc
atcatcccgcgggcgcacggcagcgcgctgttcgagcgcggcgagacccagatcctgggc
gtcaccaccctcgatatggtcaagatggcccagcagatcgactcgctcggcccggagacc
tccaagcgctacatgcaccactacaacttcccgccgttctccaccggtgagaccggccgc
gtcggctcgcccaagcgtcgcgagatcggccacggcgcgctggccgagcgggccctgatg
ccggtgctgccgagcgtcgaggagttcccgtacgccatccgccaggtgtcggaggcgctg
ggctccaacggctctacctcgatgggctcggtgtgcgcctcgaccctgtcgatgctgaac
gccggtgtgccgctgaaggccccggtggccggcatcgccatgggcctggtgtccgacgag
gtcgacggggagacccgctacgtcgcgctgaccgacatcctcggcgccgaggacgccttc
ggcgacatggacttcaaggtcgccggcaccaaggacttcgtcaccgccctgcagctggac
accaagctcgacggcatcccgtcgcaggtgctggccggcgcgctgtcgcaggccaaggac
gcccggctgaccatcctggacgtgatggccgaggccatcgacgccccggacgagatgagc
ccgtacgcgccgcgcatcaccaccatcaaggtgccggtcgacaagatcggcgaggtgatc
gggcccaagggcaagatgatcaactcgatcaccgaggagaccggcgcgcagatctccatc
gaggacgacggcaccgtgttcgtcggcgccgccgacggcccgtcggcgcaggccgcgatc
gacaagatcaacgcgatcgccaacccgcagctgcccaaggtcggcgagcggttcctcggc
accgtggtcaagaccaccgacttcggcgcgttcgtctcgctgctgcccggccgcgacggc
ctggtgcacatctcgaagctgggccgcggcaagcggatcgccaaggtcgaggacgtcgcc
aaggtgggcgacaagctgcgggtcgagatcgccgatatcgacaaccgcggcaagatctcg
ctgatcctggtggatgaggacgcagccccggccgatgcagcacccgccgacgcgtaa
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