Mycolicibacterium brumae: L2Z93_002462
Help
Entry
L2Z93_002462 CDS
T08531
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mbrm
Mycolicibacterium brumae
Pathway
mbrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2Z93_002462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrm03019
]
L2Z93_002462
03400 DNA repair and recombination proteins [BR:
mbrm03400
]
L2Z93_002462
Enzymes [BR:
mbrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L2Z93_002462
Messenger RNA biogenesis [BR:
mbrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L2Z93_002462
DNA repair and recombination proteins [BR:
mbrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L2Z93_002462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UWW09366
LinkDB
All DBs
Position
complement(2539207..2541510)
Genome browser
AA seq
767 aa
AA seq
DB search
MADELTGAREKRATEVIEALAGPGARLRDDQRRAVAALLEPSARVLVVQATGWGKSAVYW
AATAIRRDEGAGPALIVSPLLSLMRDQVVAAGRAGLRAATLNSSNFDEWNAIEAQLANGE
IDVLLVSPERLANPSFGRRVLAALEGALGLLVIDEAHSVSDWGHDFRPDYRRVSDVLTRL
NPQTPVLATTATANARVTDDVAAQLGNQPLVLRGPLARRSLQLNVLPAMSPLARYGWVVD
NLESLPGSGIVYVLTVADAQRLVDAIHAVRPDTPVAAYTGQLDADARAGLEDALRENRVK
ALIATSALGMGFDKPDLGFVVHIGSPPSPVSYYQQVGRAGRAIDHAVVALLPSPADAGIW
DYFATASIPDPGQMARVLAALADESGAGPPYSMGGSSFDSAPQAPPSLANPPYSMGGSSF
DSAPQAPPSLANPPYSMGGSSFDSAPQAPPSLANPPSVVTLEASTGIRRTRIELMLKQLA
VDGAVERLDGGWRATGKPWSYDAEHYESVIATRRREAEIMRAYTRGQRCLMQLLTESLDD
PAAAACGRCSVCLGDLPDAMGDPAGEQTMRTVAATLRANTLVLEPRKMWPGGVFGARGRI
PATLVAEPGRVLVHADAPEWTGVIAAASAGDPAAAAELSDAAIGALTRWRNQWAHRPEVV
VSLQLIGSGSPAQPVADRIAEVGRLARAQFPVPGDAPPGRDASGAEEAAHWRAALKVTPE
LAEEVSGKTVLLTVDSSGTGWPVTVAAAKLREAGATAVLPLLIHRPA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagctgaccggggccagggagaaacgggcgaccgaggtcatcgaggcgctc
gccgggccgggcgcccggctgcgcgacgatcagcgtcgcgccgtcgccgcgctgttggag
ccatcagcccgggtgctggtggtccaggccaccggctggggcaaatcggcggtgtactgg
gcggccaccgcgatccgccgggacgaaggcgccggcccggcgctcatcgtctcgccgctg
ttgtcgctgatgcgtgaccaggtcgtcgccgccggccgggccgggctgcgcgccgccacc
ctcaactcgtcgaatttcgatgagtggaacgccatcgaggcgcaactcgccaacggtgag
atcgacgtgctgctggtgtccccggaacggctcgccaacccgtccttcggccgccgggtg
ctcgccgccctggaaggcgcgctgggtctgctggtgatcgacgaggcgcattcggtgtcc
gactggggacacgacttccggcccgattaccgtcgggtgtccgacgtgctgacccggctg
aacccacagacgccggtgctggccaccaccgccaccgcgaacgcgcgggtcaccgatgac
gtggccgcccaactgggcaatcagccgctggtgctgcgcgggccgctggcccggcgctcc
ctgcagctcaacgtgctgcccgcgatgtcgccgctggcccgctacggctgggtggtggac
aacctggaatcgctgccgggatcggggatcgtctacgtgctgaccgtcgccgacgcgcag
cgcctggtcgacgcgatccacgccgtgcgcccggacaccccggtcgccgcctacaccggc
caactcgacgccgacgcgcgcgccggtctggaggacgcgctgcgggagaaccgggtcaag
gcgctcatcgccacctccgcgctcgggatgggattcgacaaacccgacctgggcttcgtc
gtgcacatcggcagcccgccctcgccggtgagctactaccagcaggtgggacgcgccggg
cgtgccatcgaccacgccgtggtcgcgttgctgccctcacccgccgacgccggcatctgg
gactacttcgccaccgccagcatccccgaccccggccagatggcccgggtgctggccgcc
ctcgccgacgaaagcggcgcgggcccgccctattcgatgggcgggtccagcttcgactcg
gctccgcaagctccgccgagcctcgctaacccgccctattcgatgggcgggtccagcttc
gactcggctccgcaagctccgccgagcctcgctaacccgccctattctatgggcgggtcc
agcttcgactcggctccgcaagctccgccgagcctcgctaacccgccgtccgtagtgacc
ctggaagcctccaccgggatccgccgcacccgcatcgagttgatgctcaagcaactggcc
gtcgacggcgcggtcgagcggctcgacggtggctggcgcgccaccggcaaaccgtggagt
tacgacgccgagcactacgagagcgttatcgcgacccgtcgccgcgaagccgagatcatg
cgggcctacacccgcggccagcgctgtctgatgcagctgctgaccgaatccctcgacgac
ccggcggccgccgcgtgcggacgctgctcggtctgcctcggcgacctgcccgatgcgatg
ggcgatccggcgggggagcagacaatgcgcaccgtcgccgccacgctgcgggccaacacc
ttggtgctggagccgcggaagatgtggcccggcggggtgttcggcgcgcgcggccggatc
cccgccacgctggtcgccgaacccggccgggtgctggtgcacgccgacgccccggaatgg
accggcgtgatcgccgcggcgagcgccggtgatccggccgccgccgccgaactgagcgac
gccgcgatcggcgcgctgacccgatggcgcaaccagtgggcgcaccgccccgaggtggtg
gtgtcgctgcagctcattggatccggcagcccggcgcagccggtcgccgaccggatcgcg
gaggtcggccgactggcgcgggcacagtttccggtccccggtgacgccccgcccggacgg
gacgcctctggcgcggaggaagccgcgcactggcgcgcggcgctgaaggtgacccctgag
ttggcggaggaggtgagcgggaagaccgtgttgctgaccgtcgactccagcggcaccggc
tggccggtgacggtcgcggccgccaaactgcgcgaagcgggcgcgacggcggtgctgccg
ctgctgatccaccggcccgcctga
DBGET
integrated database retrieval system
