Mycolicibacterium brumae: L2Z93_003701
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Entry
L2Z93_003701 CDS
T08531
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mbrm
Mycolicibacterium brumae
Pathway
mbrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L2Z93_003701 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbrm03400
]
L2Z93_003701 (recD)
Enzymes [BR:
mbrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L2Z93_003701 (recD)
DNA repair and recombination proteins [BR:
mbrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L2Z93_003701 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
RecD_N
AAA_22
UvrD-helicase
Helicase_RecD
PhoH
SH3_13
TraI_hel_assoc_N
nSTAND3
AAA_28
AAA_29
AAA_16
TrwB_AAD_bind
CbiA
Mg_chelatase
MukB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UWW10568
LinkDB
All DBs
Position
complement(3810181..3811965)
Genome browser
AA seq
594 aa
AA seq
DB search
MVDPFDRALARRADGLLAEFNRAGVLDAADVHVAQRLCALAGESDEAVALGAALAVRAVR
GGSVCVDLAAVGADDPAELPWPELPGWRAAITASPLAGVPADGGPGWAPGKPPVLRLDDS
GLLYLDRYWREEEQVCRDLLQRAGNRPPRGEDTAALEAGLQRVFRRPGSDEQRDAARIAL
TQSTTVLTGGPGTGKTTTVAGLLALLAEDAERSGRRAPRIALAAPTGKASARLQQAVAVE
MAHLDPVDRARLPDPQAVTLHRLLGFRPGSATRFAHHRGNRLPHDVVVVDETSMVSLTMM
ARLLEAVRPEARLILVGDPDQLTSVEAGAVLADLVEGLGARPDTRIATLSTSHRFGTEIG
ALATAIRAGADADVLALLRGAVPGIEFVDTAEPSAALRAVLLPHAMAVRTAALSAGARDG
SALAALDQHRLLCAHREGPFGVRHWNRQVERWLGDETGDNLWAEWYAGRPILVTANDYGV
GLYNGDTGVTVVEGGQLRAVIETGSGQASFATSRLADVETMHAMTIHKSQGSQAAEVTVL
LPGPDSRLLSRELFYTAVTRAKSKVRIVGTEEGVRAALARRVVRASGLSARLRA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccccttcgaccgcgcgctggcccggcgcgccgacggcctgctggcggagttc
aaccgcgccggagtgctcgatgccgcggatgtgcatgtcgcacaacgattgtgcgcgctg
gccggggagtccgacgaggcggtggcgctgggcgccgcgctcgcggtccgcgcggtgcgg
ggcggttcggtctgcgtcgacctggccgccgtcggcgccgacgaccccgccgaactgccc
tggccggagctgcccggttggcgcgcggcgatcaccgccagcccgctggccggcgtcccg
gccgacggcggcccgggctgggcgccgggcaaaccacccgtgctgcgcctcgatgactcc
ggtctgctctacctggacaggtactggcgcgaggaagagcaggtctgccgagatctgttg
cagcgcgccggaaaccgtccgccgcgcggcgaggacaccgccgcactcgaggcgggtttg
cagcgggtgttccggcggccgggctccgacgagcagcgcgatgcggcgcggatcgcgctg
acccagtccaccaccgtgctgaccggggggccgggcaccgggaagaccaccaccgtcgcg
ggtctgctggcgctgctcgccgaggacgccgagcggtctggccggcgcgcgccgcggatc
gcgctggccgcgccgaccggcaaggcctcggcgcggctgcagcaggccgtcgccgtggaa
atggcccacctcgatccggtcgaccgggcccggctgccggacccgcaggccgtcacgctg
caccggctgctcggcttccggcccggcagcgccacccggttcgcgcatcaccgcggcaat
cggctgccgcacgacgtggtggtggtcgacgagacctcgatggtctcgctgacgatgatg
gctcggctgctggaggcggtgcgcccggaggcccggctgatcctggtcggcgatcccgac
cagctgacgtcggtggaggccggcgcggtgctggccgatctggtcgagggcctgggcgcg
cgcccggacactcggatcgcgacgctgtccacctcgcaccgcttcggcaccgagatcggc
gcgctggcgacggcgatccgagccggcgccgacgcggacgtgctggcgttgctgcgcggg
gcagtgccgggcatcgagttcgtcgacaccgcggagccgtcggcggcgctgcgcgcggtg
ctgctgccgcacgcgatggccgtccggaccgccgcgctgagcgccggcgcccgggatggg
agcgcgctggcggcgctggaccagcaccggctgctgtgcgcgcaccgggaaggcccgttc
ggggtgcggcactggaaccgccaggtggaacgctggctcggcgacgagaccggcgacaat
ctctgggccgagtggtacgccggccggccgatcctggtgaccgccaacgactacggggtc
gggctgtacaacggtgacaccggcgtcaccgtcgtcgagggcggccagttgcgggcggtc
atcgaaaccggttccgggcaggcgagtttcgccaccagcaggctcgccgatgtggagacc
atgcacgccatgacgatccacaagagtcagggcagccaggccgccgaggtcaccgtgctg
ctgcctggcccggactcccggctgctgtcgcgagagctgttctacaccgcagtcacccga
gctaagagcaaggtccggatcgtcgggaccgaggaaggtgtccgggccgcgctggcccga
cgggtggtgcgcgcgtcgggattgagcgcgcggttgcgcgcctga
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