Metarhizium brunneum: 26238451
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Entry
26238451 CDS
T10216
Symbol
msp-5, G6M90_00g015180
Name
(RefSeq) Pre-mRNA-splicing factor
KO
K12830
splicing factor 3B subunit 3
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
26238451 (msp-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrn03021
]
26238451 (msp-5)
03041 Spliceosome [BR:
mbrn03041
]
26238451 (msp-5)
03036 Chromosome and associated proteins [BR:
mbrn03036
]
26238451 (msp-5)
Transcription machinery [BR:
mbrn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
26238451 (msp-5)
Spliceosome [BR:
mbrn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
26238451 (msp-5)
Complex B
26238451 (msp-5)
Complex C
U2 SnRNP specific factors
26238451 (msp-5)
Chromosome and associated proteins [BR:
mbrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
26238451 (msp-5)
TFTC complex
26238451 (msp-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Beta-prop_BBS7
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
26238451
NCBI-ProteinID:
XP_014549007
UniProt:
A0A7D5Z2Y2
LinkDB
All DBs
Position
1:complement(join(5058515..5058541,5058608..5059895,5060087..5062166,5062308..5062551))
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AA seq
1212 aa
AA seq
DB search
MATTSNMFLYSLTVQPPNNVVQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVL
SHNVFGIIRSLASFRLAGSNKDYLIIASDSGRITVVEYLPAQNRFSRLHLETYGKSGVRR
VIPGEYLACDPKGRACLIASTEKNKLVYVLNRSSQAELTISSPLEAHKPGVLVISMVALD
VGYANPVFAALEMDYSEVDQDSSGQALEEVETQLVYYELDLGLNHVVRKWSEPVDPTASL
LFQVPGGNDGPSGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRTIVSGVMHKL
KGSAGAFFFLLQTEDGDLFKVTIDMVEDEEGSATGEVKRLKIKYFDTVPVATSLCILKSG
FLYIASQFGNFSFYQFEKLGDDDTELEFSSDDFPVDPQASYDPVYFHPRPAENLALVESI
PSMNPLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIPSAVWT
LKLNRGERYDAYIVLSFTNGTLVLSIGETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHP
KGIRHIRNGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKE
MFGTVTCLSLGEVPEGRVRSSFLAVGCDDCTVRVLSLDPESTLESKSVQALTAAPSSLAI
IAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGTT
CVLGLSSRPWLGYSDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFSID
RLGDTLTQKAVSLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLMADPAVVNGDATV
LPPEDFGYPKGNRRWASCINVIDPVSEEPQVVQTVDLENNEAAVSAAIVPFASQDNESFL
IVGTGKDVVVNPRSFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIPFQGKLLAGVGK
TLRVYDLGMRQMLRKAQAEVAPQQIVSLNTQGSRIIVGDIQQGVTYVTYKPTTNKLIPFA
DDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQSGLHLMNARDYLHGT
SQRLDLMCHFYTQDIPTSMAKTSLVVGGQDVLLWSGLMGTIGVFIPLISREDADFFQSLE
SHLRTEDPPLAGRDHLMYRSYYAPVKGIIDGDLCERYTLLPNDKKQMIAGELDRSVREIE
RKISDIRTRSAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacttcgaacatgttcctgtactcgctgacggtccagccgccgaataatgtc
gttcaggcggtcctgggtcagttcgcaggcaccaaagagcagctcatcatcactggtgct
ggctcacagctgactctattgcgtcccgatccttccctaggcaaggtcacgaccgttcta
tcccataacgtctttgggataattcggtctctggcctctttccgcctggcgggcagtaac
aaagattatttgatcattgcctcggattctggcagaatcacggtcgtcgagtacttgcca
gcccaaaatcggttcagtagactgcacctcgagacttatggcaaatctggtgtcaggcga
gtgattccaggagaatatcttgcgtgcgaccctaagggtcgagcttgtctcattgcttcc
accgagaagaacaagctagtatatgttctgaaccgaagttcacaggcagagctaacaatc
tcctcgcctttggaagctcacaaacctggtgtgttggttatttccatggttgccttggat
gttggatatgccaatcctgtttttgcagccctcgaaatggactactctgaggtcgatcaa
gactccagtggccaggcgctggaggaagtcgaaacgcagcttgtttactacgagctagat
cttggtctcaatcacgttgtgagaaaatggtcggaacctgtcgatcctactgcctccctt
ctttttcaggttcccggtggtaacgacggccccagcggagtactagtctgtggcgaggag
agcattacatataggcactcaaaccaggacgcgttccgtgtgccgataccgcgaagaaag
ggagccaccgaggacccgtcacgaaaacgcacaatcgtctctggtgtgatgcacaagtta
aagggcagtgccggcgcgtttttcttcctattgcaaactgaggatggcgatctgtttaaa
gtgactatcgacatggttgaggatgaagaagggagcgcgactggtgaagtgaaaagactt
aagatcaagtactttgataccgtaccagtcgccacaagtctctgcattctaaagagtggg
tttctctatattgccagtcagtttggcaacttttctttctatcagtttgagaaactcggc
gacgatgatacggagcttgagttcagcagcgatgacttcccagttgacccgcaagcatcg
tacgatccggtctatttccatcctcgacctgctgaaaacctggccttggtcgagagtatt
ccatcaatgaatccgttacttgactgtcaagttgcgaacttgacaggggaagacgcaccc
caaatctacactgtctgtggaaatggagcacgaagcacgtttcgaatgctcagacatggc
ctggaagtcaatgaaatcgtggcctcggaattacctggcataccctctgcagtgtggacc
ctcaaactaaaccgaggtgaacggtacgatgcttacatcgtcttatcatttacaaatgga
accctggtgcttagtatcggcgagacagtagaggaagtcagcgattctggtttctcgacg
agcgttcccacgctagccgcacaattattaggggatgatggccttattcaggttcatcca
aagggcattcgacatattcgcaatggcaaggtgaacgagtgggatgccccgcaacatcgg
tctattgtggcagcttctacaaatgcccaccaagtggccattgccttaagttcgggtgaa
atagtgtattttgagatggattctgatggctctcttgcagagtatgatgagaagaaggag
atgtttggcactgttacctgtctgagcctgggcgaagtacctgaaggtagagttcgcagc
tcattcctggccgtgggctgtgatgattgtacagttcgtgtactcagtcttgaccctgag
tcgacactcgagagcaagtcagtccaagcattaacagctgcgccgtcatcgttagctatt
attgcgatggatgactcgtcatcaggaggatctacactttatcttcatatcggcttgcat
tctggtgtttatctacgaacagttctcgacgaggtcaccggtgaactaactgacacaaga
caaaagttcttggggccaaaacaagtccggcttttccaagttaccgtacagggaactact
tgtgttttgggtctcagctcccggccttggcttggatactccgatccaattaccaagggg
ttcgtcgtcaccccgctcaactacgtagatctcgaatggggctggaactttagcagcgag
cagtgcgaggaaggtatcgtcggcattcaaggccagtcactgaggatcttctctattgac
cggttaggtgatactttgactcagaaggctgtttctctgacctacactcctaaaaaactc
atcaaacatccagagcagcctctgttttacactattgagagtgataataatacacttccg
cctgatcttcgggcgcagcttatggctgatccggccgtcgtaaatggcgatgcaacagtt
ttgccacccgaggactttgggtatcctaaaggcaatcgtcgatgggcatcatgcatcaac
gtgatcgaccctgtctccgaagagccgcaagttgtgcagacggttgatttagaaaataac
gaggcagccgtaagcgctgctattgttccctttgctagtcaagataatgaaagttttctc
attgttggcactggtaaagatgtcgtggtaaatccacggagcttttcagaagcatacatt
tacgtgtatcgtttccaggaagaagggagagagcttgagtttattcacaaaacgaagatc
gaagaacccgctttggcgttgatcccgttccaagggaaactcctggctggtgtcggaaaa
actttgcgagtatacgatcttggtatgcggcaaatgctgcggaaagcacaagcggaggta
gcacctcagcaaatcgtatccctaaacactcaaggcagccgcattatcgttggtgatatc
caacaaggtgtcacatacgtcacatataagcctactacgaacaagctcatacctttcgca
gacgataccattgccaggtggaccacgtgcacaacaatggtggactacgagtcagtggcc
ggcggagacaaattcggaaacatgttcatcgttcgttgtccaccaaaagcaagtgaagag
gctgatgaagaacaatctggtctccatttaatgaatgctagggactacctccatggaacc
tcacagcgtcttgatttgatgtgccacttttacactcaggatatacctactagcatggca
aagaccagtctggtggttggcggacaggatgtgctattatggagcggccttatgggcact
attggtgtcttcattccgctaataagtcgagaagacgcagactttttccagagtcttgaa
tcacatctccggactgaggatcctccattagctggaagagatcatcttatgtaccgatca
tactatgcgcctgtgaagggcataattgatggagatctctgtgagcgatatactttgctt
cccaacgataagaagcaaatgattgccggcgaattggaccgttcggtccgagagattgaa
aggaaaatctcggatatccgcactaggtctgctttctaa
DBGET
integrated database retrieval system
