Metarhizium brunneum: 26239877
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Entry
26239877 CDS
T10216
Symbol
PAN2, G6M90_00g039600
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
26239877 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26239877 (PAN2)
Enzymes [BR:
mbrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
26239877 (PAN2)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
26239877 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
26239877 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
Beta-prop_THOC3
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
VPS11_N
Beta-prop_WDR5
EIF3I
Beta-prop_WDR36-Utp21_1st
eIF2A
Motif
Other DBs
NCBI-GeneID:
26239877
NCBI-ProteinID:
XP_065986561
UniProt:
A0A7D5UWT2
LinkDB
All DBs
Position
2:complement(join(3360991..3361849,3361915..3362125,3362184..3362429,3362499..3362586,3362638..3362742,3362791..3362930,3362987..3363237,3363295..3363711,3363767..3364353,3364410..3364536,3364596..3364771,3364831..3364938,3365072..3365092))
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AA seq
1111 aa
AA seq
DB search
MDGDWDEVARIPFPPPGVHAMPTPVTTMTFDTFQELLWTGNDYGRVTSFLGSELQRYTSF
KAHLSTDGAVRQILVNDKGVIVLGSKDVHMAQRRGPPIWHIKHDDTKELRCMSFTSKGTA
EIIVAGLQDTMLVIDLNKGEVVKQIATEHQYSIMKRGRYICAATKNGTVNLLDPVSFAVV
KSWNAHSALINDMDAQHDFIVTCGYSLRQGQTYMLDPFLNVFDIKKMSSMPPIPFPAGAA
YVRMHPRMLTTSIVVSQSGQMHVVDLMNPNTSNVRQANVLTYLSMFEIAPSGESMALTDA
ECYIHLWGSPSKLHFVDLPTPIEFASPEEHAPQIEWTPETPLNSVGLPYYRDVLASAWPD
LVSDVGAPPIRFDPQFLVSLKPTEFGLYGRNTRGFRRNQVEDTRNSHKSANSGLKAPKFL
SEKARESAISDSRTDDKTDDVPSPVAENEIESKKSDVPVMYRNVEIKYSKFGVDDFDFGF
YNKTRYSGLEIHISNSYANSLLQIMHFTPLIRNLALQHAATACVSEICLLCELGFLFDML
QKADGSICQATNLLRTLSSHPQAGPLGLLEEDPHGSSLNVMLQGLTRFLLDKIVSDYKSM
SPTSSAMEQILATSATSSIRCMNCRSEYTRPGSTYVNDLLYPPFKPPGRNAKMPRVTFSQ
VLKSSVERETTSKVLMLNTAITSHDHRMLWSTPGWLPEEIGIIVEQGQFFCYEGEDLKLH
LQRGIHNITVYSLIGMATNIEGGQTQKPHLVSMVNVAHAEQEAPGQSQWHLFNDFLVRSV
STDEALTFNTSWKVPSVVSFQIKEANNKIDSTWKHQLDTSILYHDFPNPNSETKTYHILD
PKTERPGPDTIVALDTEFVAIRQPEIEMNSDGERETIRPIVYALARTSVVRGQGENEGRP
FIDDYILIQEPIVDYLTSYSGITREDLDPRISKHSLLPLKMAYKKLWILLNLGCKFLGHG
LKQDFRVINIHVPKSQVIDTIDLFFLKSRLRKLSLAFLAWYLLKEDIQMETHDSIEDSRT
ALKLYRKYLEFEDAGILETMLQDIYRAGRDVNFKPPRKDDVGVQRTDTPPLPVDSSTPGP
STPVRKIIGMAPGSGFGGGTSWTPGKGSPLR
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgactgggatgaggtcgcccgcattccgttcccgcctccgggcgtccatgca
atgccgacaccggtaactacgatgacctttgatactttccaagaactactatggactgga
aacgattatggtcgcgttacctcttttcttggctcggaactacaacgatatacctccttc
aaagcacatctttcgactgacggagcggtacgacaaatattggtcaacgacaagggcgtc
atcgtcttggggtcaaaggatgttcacatggcacagaggagagggccgccgatatggcac
atcaaacacgacgacacgaaggaactgcggtgcatgagctttacttccaaagggacggcc
gagatcattgttgcgggattgcaagacacaatgcttgtcatcgaccttaataagggcgag
gtcgtgaagcagatcgcaaccgaacaccagtactccatcatgaagcgaggaaggtatatt
tgcgcggcgaccaagaacggaacggtgaacctccttgacccagtgtcctttgcagttgtc
aagtcttggaatgctcactctgcgctgatcaatgacatggatgcccagcatgacttcatc
gttacatgtggatattcgcttcgacaaggccaaacatacatgctcgatccattcttgaac
gtgtttgatattaaaaagatgtcgtcaatgccaccaataccttttcctgccggggcggcg
tacgttcgcatgcatccaagaatgttgactaccagtattgtggtctcacagtctggccaa
atgcatgtggtcgacttgatgaaccccaacacaagtaacgtgagacaggcaaacgtcctg
acctatctgagtatgtttgagattgcgccgtctggagaatcaatggccttgaccgatgct
gagtgctatatacacctttggggatcgccttcaaagcttcactttgtcgacctgccaaca
ccaatcgagtttgctagcccagaggaacacgctcctcaaatagaatggacccctgaaaca
ccgctgaactctgttggattgccctactatcgggacgtgttggcctcggcctggccggat
ctggtatcggatgttggcgcccccccaatcaggtttgatcctcagtttctcgtgagcctc
aagccgaccgaatttggcctgtacggccgcaacacgagaggcttcaggaggaaccaggtt
gaggataccagaaacagccacaagtctgccaattctggactcaaggcacccaagttcctg
agtgagaaagccagagagtctgcaatatccgattccaggacggacgataagaccgacgac
gttcctagcccagtggccgagaacgagattgaaagcaagaaatcagacgtgccggttatg
tatcgcaacgttgaaatcaagtacagcaagttcggagtagatgactttgattttggattc
tacaacaaaactcgttactcaggcttggaaattcatatttcaaactcatacgccaactca
ctccttcaaatcatgcactttaccccccttatacgcaacctagcccttcaacatgcggct
acggcctgtgttagtgaaatctgcttgctgtgcgaacttggcttccttttcgacatgcta
caaaaagcggacggctcaatctgtcaggcaacaaacctgctgagaacacttagtagccac
ccacaagccggaccgcttggcctcctcgaagaggacccccacggctcgtctctaaacgtc
atgctgcaagggctcactagatttctcttggataagattgtttctgactacaagagtatg
tcaccaacatcatctgccatggaacagattcttgcaacctcagctacaagctctattcga
tgcatgaattgtaggagcgagtatacaagaccaggttccacatatgtcaacgacttgctt
tatccaccatttaaacctcctggacgaaacgccaaaatgcccagggtcactttttctcag
gttcttaagagtagcgttgagagagagactacctctaaggtcttaatgttgaatactgca
attacgagtcacgaccatcgcatgctgtggtccactcccggctggcttcctgaggagatt
ggaatcattgttgagcaggggcagttcttctgttacgagggagaagacctgaaacttcac
ttgcagcgaggaatccataatatcacagtatattcacttatcggaatggcgacaaacatt
gagggtggccaaacgcaaaagccgcacctggtatccatggtcaatgttgcacacgccgag
caagaagctcccggacaaagtcaatggcacttgttcaacgacttcttagttaggtctgtc
agtacagatgaagcccttacattcaacacgtcatggaaagtccctagtgttgtatcattc
cagatcaaagaagcgaacaacaaaattgattctacttggaaacatcagctggatacttcg
attctgtatcatgattttccgaatccaaactctgaaaccaaaacatatcacatcctagat
ccgaagactgagcgtcctggcccggatacaatagtagcactagacacggaatttgtcgcc
attcgacagcccgagattgaaatgaactcggacggcgaacgagagacgattcgtccaatt
gtctatgccctggccagaacatctgtcgtccgcgggcagggcgagaacgagggacggccc
ttcatcgacgactatattttaatacaagagcccattgtggattatctgacctcgtactct
ggcataacccgagaagatctggacccgcggatttccaaacacagcctgctcccactgaag
atggcctacaagaaactctggattctgctcaacctcgggtgcaaattcctcggccacggt
ctcaaacaagatttccgcgttataaatatccatgttcccaagtctcaggtcatcgacact
atcgatctgttcttcctaaagtcgagacttcggaagctctcgttggcatttctagcgtgg
tacctcctaaaggaggacattcaaatggaaacgcacgactcgattgaggactcccggacg
gcactcaagttatatcggaaatatctagagtttgaagacgctgggattctggaaaccatg
ctgcaggatatttatcgcgccggaagagatgtcaactttaaacctccgcggaaggatgac
gtgggtgtccagaggacggacactccgccgttgccggtggactcgtccacgccaggaccg
tccacgcccgtgaggaagattattggtatggcgcccgggtctgggtttggcggtggcacg
agttggacgccggggaagggatcgccgctacgatag
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