Metarhizium brunneum: 26240515
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Entry
26240515 CDS
T10216
Symbol
pta1, G6M90_00g102550
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor complex subunit pta1
KO
K06100
symplekin
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
26240515 (pta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrn03021
]
26240515 (pta1)
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26240515 (pta1)
Transcription machinery [BR:
mbrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
26240515 (pta1)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
26240515 (pta1)
U7-dependent histone pre-mRNA processing factors
26240515 (pta1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
26240515
NCBI-ProteinID:
XP_014546092
UniProt:
A0A7D5V5G3
LinkDB
All DBs
Position
6:complement(join(3021815..3021945,3022046..3023463,3023515..3023642,3023700..3023865,3023950..3024284))
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AA seq
725 aa
AA seq
DB search
MSSNLSVPEQIRQLNDARKLVLGDVKYYPNVVRGLLPIIGPNAQVELRRWGAEFLAEAFS
TPALPNGEKETMQLYVLATVESLLQNEREDPQVLRSVILTAASIYPLALRWIINNGYDTV
TWDKMLSIKQKILRLWESAVPTVRISCIKFAQRVVLAQTVSTGAEFRHAGILDISLDKVP
PNHQSLDPRNLEAEASGLLDRMLVVLQESTDTLVVDATLNSLPILVRTRPATSSRILNTL
LSFNPLQLANSPLTPRSKVMIKSMEKTARLLLLHVTKRDPHNPMVPRIHQHIERMARTVM
DVLDDSSRKRPLEAQQHDGYDAKRQRVAESYTPQIPPLGSGPHSLADMFTLVGHDGLKSF
DLSQVPAAMIAKVTVTALSRIDSQFLSKAVDGVRGRLTTLANAPAPELNPNTAPLGVDED
DDDYEPDFYQAEDTEQILNKLDGASPPLPAELTALDSSLALASFSLPQPAQLTPETALSA
GSGTVAKVVDMMKSLEEPTAKKHKAGFIRLAASSGSKDAWMTILTRLATRSSTGLEEISV
KGEEDESSRQPSLGNTIREVIYNYVMEDFRKHIDVAVSWLCEEWYNDKMQARLGGDYPGN
YEKNTLRLINGFLPYLHPQDKVLTRFLSEIPELNRAMLSRVKDMCRDPSVTQLALTSLLY
LAMMRPPVKEMALDTVQDIWTEFEDARPMAGKYLSKYRPGFVEAAEAKANRDSTGLESSG
TAIAT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaacctatcagtgccggagcagatccgccagctcaatgacgcgcgaaagctc
gttctgggggatgtaaagtactatccgaatgtggtgagaggtcttcttccaatcattgga
cccaatgcgcaggttgaattgcgacgatggggagcggaattcctggccgaggctttttca
acgcctgcactccccaacggcgagaaggaaacgatgcagctctatgttctggcgacggtg
gaatctctgttgcagaatgagagggaggatccgcaagtgctgcggagtgttattctgacg
gcggcgagtatttatccgctggctttgcgatggattataaataatgggtacgatacggtc
acatgggataagatgttgagtatcaagcagaaaatattgcgattgtgggagagtgctgtt
ccaaccgtaaggattagctgcattaagttcgcccagagggtggttcttgcgcagaccgtc
tcaacgggggcggagtttcgacacgccggtattcttgacatctcactagacaaggttccg
cctaaccatcagtcactcgatcctagaaacctcgaggctgaagcgtcgggacttttagat
cgtatgcttgtcgttttgcaagagagcactgatactcttgttgtcgatgcgacactaaac
agcctgccaattcttgtacggaccagacccgcgacatcgagccgaattcttaacacacta
cttagcttcaaccctcttcaattagcgaactcgcccctgacaccgaggagcaaagtcatg
atcaagtccatggagaaaactgcgagattactgctccttcatgtcactaaacgagatcct
cataatccaatggtaccaagaatacaccagcatattgaacgcatggcacgtacggtgatg
gatgttctggacgactctagcaggaagcgaccactggaagcacagcaacacgatggttat
gatgccaaacgccagcgagtggctgagtcatatacaccacaaattccaccccttggctct
gggccacacagcttggccgatatgtttacacttgttggccacgatggtttgaagtcattt
gacttgtcacaagtcccagctgccatgatagcaaaggtcacagtcacagcattatcacgt
atagactctcaattcctgtcaaaagctgttgacggagtgcgtggacgactcaccacgttg
gctaatgcacctgctccggaattgaatcctaatactgcaccgcttggcgtcgacgaagac
gacgatgactacgaacccgatttctatcaggcagaagataccgagcaaattttgaacaag
ctagatggagcatcgccgccccttcctgctgaactcacagctttggatagctcactagct
ctggcatcattcagcttacctcagcctgctcaacttacacccgaaacggcacttagcgct
ggaagtggaacagtagcaaaggtggtcgatatgatgaaatcactggaggaacctacggcc
aagaagcataaggctggatttatccgtctggcagcaagctcggggagcaaggacgcctgg
atgaccatactaacccgacttgccacgcggtcgtccactggattagaggaaatttccgta
aaaggcgaagaagacgaatcgtcgcggcaaccgtctcttggcaacactattcgcgaagtt
atatacaactatgttatggaggatttccgaaaacatatcgatgtcgccgtgtcatggctc
tgcgaggaatggtacaatgacaaaatgcaggctcgattgggcggggactaccccggaaac
tacgagaaaaacacattacgactgataaacggctttcttccctaccttcacccacaagac
aaggttttgaccaggtttttaagcgaaatacccgagttgaatcgtgctatgctgtcaaga
gtcaaagacatgtgccgtgaccctagcgttacgcagttagctctgacgagtttgttgtat
ttggctatgatgcggcctcctgtgaaagaaatggctctcgataccgttcaggatatctgg
acagagtttgaggatgccaggccaatggcaggcaagtacctgtccaagtatcggcctgga
ttcgtggaagcggccgaggccaaggcgaacagagacagcactggtctagaatcatcagga
acagccattgcgacatga
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