Metarhizium brunneum: 26241799
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Entry
26241799 CDS
T10216
Symbol
msp-41, G6M90_00g072960
Name
(RefSeq) Pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
26241799 (msp-41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26241799 (msp-41)
03041 Spliceosome [BR:
mbrn03041
]
26241799 (msp-41)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
26241799 (msp-41)
Spliceosome [BR:
mbrn03041
]
Complex B
Other components
Prp19-related factors
26241799 (msp-41)
Complex C
26241799 (msp-41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_8
MIT
AbiH
Motif
Other DBs
NCBI-GeneID:
26241799
NCBI-ProteinID:
XP_014545766
UniProt:
A0A7D5UZE6
LinkDB
All DBs
Position
4:join(2114185..2114232,2114300..2114470,2114517..2116748)
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AA seq
816 aa
AA seq
DB search
MAVSAEMKSTSRLPIVSNEDFIYEQDVAGDPASIKPWLVYIDFKSRHGTLPQQNFVMARA
CAQLPRSYKLWKMYLAFRTEHVSKLNPAIFASEYNKVNALFEKALILLNKMPRVWEMYLQ
FLVKQPAITLVRRTFDRALRALPITQHNRIWALYVPFSNAASGDTAVKIWRRYIQVHPEE
AEDFIELLIESGLYTEAAISYVNLLNNVRFASKTGKGHYELWSEMVDLLVDHASEIEVNY
ESGIDVESIIRSGIARFPDQRGKLWVGLATYWIRRGSFERARDTFEQGITTVMTVRDFAL
IFDSYTEFEESIIKALMESVTNRTDMGVEDEDADFELDVRMMRFEHIMDRRPFLVNDVLL
RQNPNLVSEWEKRVALWGGNKQEAVRTYANAIASIHPKRAVGSFYKLWASYARFYEQGGD
LRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNEKFDEAVRIMAKAVQAPKRSTVDY
FDEALSAQQRVHKSWKLWGFYVDLVESVSTLSEVKRVYERIFELRIATPQTVVNYATLLE
EHKYYEESFKIYERGLDLFSYPVAFELWNMYLAKAVNRKIGIERLRDLFEQAVEDCPPKF
AKTIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLSSTRPI
YERAISALPDTEAKEMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNADFWARWEQFE
VQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRDSDHRDQHAGTTAELVRQSS
AMHGFVAASSGPPPGVTGQQDSPANPDAIDIDGLDD
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcggctgagatgaagtcaacatctcgtctccccatcgtctcaaacgaggat
tttatatacgagcaagacgtggcaggtgatccagctagcattaaaccttggctagtctac
atcgattttaaatctcgtcatggcacacttccgcaacaaaactttgtcatggctcgtgca
tgcgcccagttgccgcgatcatacaagctctggaaaatgtatctcgccttccgtaccgag
catgtgtcaaagttaaaccccgctatcttcgcatccgaatacaataaagtcaacgccttg
tttgaaaaggcacttatacttctcaacaaaatgcctcgagtatgggaaatgtatcttcag
ttcctcgtcaaacagccagcaatcactctcgtaagacgaactttcgaccgcgcgttgagg
gcgctaccaatcacgcaacataatcgaatatgggccttgtatgtaccattctcaaatgct
gcgtcaggtgacactgcagtcaaaatttggcggcgatatattcaggtgcatccggaggag
gcagaggatttcatcgaacttctaatcgaatcgggtttatataccgaagccgcaataagc
tatgtcaacctcctcaacaacgtccgattcgcgagcaagactgggaagggccactacgaa
ctttggagtgaaatggtagatcttcttgtagaccatgcctcggagattgaggtgaattat
gaatcgggtatcgacgttgaaagtatcatcagaagcggaatcgctcgttttcccgatcag
aggggcaagctttgggtgggtctagccacctactggatccggagaggcagtttcgagcga
gcacgagatactttcgaacagggcataacaaccgttatgacagtccgcgactttgcgtta
atattcgattcatacaccgagttcgaagagtccatcatcaaggcgcttatggaaagcgta
acaaatcggaccgacatgggagtggaagatgaagatgcagacttcgaattggatgtgcga
atgatgcggttcgagcatataatggatcgacgaccatttttagtgaacgatgtgctactt
cgccagaacccaaatcttgtctcagagtgggagaaacgagttgctctgtgggggggcaat
aaacaagaagctgtgcgcacatatgcgaatgctattgcttctatccaccctaaacgagcc
gttggctcgttttataaactttgggcgagctatgcgcgcttctatgaacaagggggggat
ttaaggaacgctcgcataatcatggagaaagcagtcaaggttcccttcaaatctgttgca
gagttggctgacatgtggattgagtgggcagaaatggaacttcggaatgagaagtttgat
gaagccgttcgaatcatggcaaaagctgtccaagcccctaagcgatctacagtcgactac
tttgacgaggcactttcagcgcaacaaagagttcataagagctggaaactttggggtttc
tacgtggatctcgtagaaagtgtctctactttgagcgaagtaaaacgagtctatgaacgc
atttttgaacttcgaatcgcaacaccacagacggttgtcaactacgcaactcttttagaa
gagcacaagtattacgaggagtcattcaagatttatgagcggggcttagacttattcagc
tacccagtcgccttcgagctctggaatatgtacctggcgaaagcggtgaatcggaagata
ggtattgagcggcttcgagatctcttcgagcaagctgtcgaagactgccccccgaagttt
gccaagaccatttacttgatgtatggaaacttggaagaggagcggggtcttgcacgacat
gccatgcggatatatgagagagccacgagggcggtcagtgatgaagaccgtgcggatatg
ttcaacttctacattaccaaatccgcttctaattttgggttgtcgtctactcggcccatc
tatgaaagggccatttccgcattgccggataccgaagctaaggagatgtgcctcaagttt
gcggatatggagaagcgattaggtgagattgacagagcgcgtgcaatttacggacatgcg
tcacaattctgcgacccccgaacaaatgccgacttttgggcgaggtgggaacaatttgag
gtccaacacggcaacgaagacacattcaaggagatgttgcgcatcaagagaagcgtccag
gctcagtacaataccgatgtcaacttcattgcatcacaggccctcgctcggagtcagcgg
gattcagatcatcgtgatcaacacgctggtaccacggccgaacttgtcaggcaatcctcg
gcaatgcatggctttgtggcagcgagtagtgggcctccaccgggggtaactggtcaacaa
gattcacctgcaaatccagatgcgattgatatagacggccttgatgattaa
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