Metarhizium brunneum: 26243927
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Entry
26243927 CDS
T10216
Symbol
mtr4, G6M90_00g031910
Name
(RefSeq) ATP-dependent RNA helicase mtr4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
26243927 (mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26243927 (mtr4)
03041 Spliceosome [BR:
mbrn03041
]
26243927 (mtr4)
03009 Ribosome biogenesis [BR:
mbrn03009
]
26243927 (mtr4)
03016 Transfer RNA biogenesis [BR:
mbrn03016
]
26243927 (mtr4)
Enzymes [BR:
mbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
26243927 (mtr4)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
26243927 (mtr4)
Spliceosome [BR:
mbrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
26243927 (mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
26243927 (mtr4)
Ribosome biogenesis [BR:
mbrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
26243927 (mtr4)
Transfer RNA biogenesis [BR:
mbrn03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
26243927 (mtr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
MTR4-like_stalk
DEAD
Helicase_C
DEXQc_Suv3
ResIII
AAA_22
BSP_II
Motif
Other DBs
NCBI-GeneID:
26243927
NCBI-ProteinID:
XP_014543126
UniProt:
A0A7D5UV66
LinkDB
All DBs
Position
2:complement(join(694016..694196,694258..697373))
Genome browser
AA seq
1098 aa
AA seq
DB search
MDELFDVFDGQAGAQSASDSEREPQTSRARDKSKKRKADEAMNGTAAVETPKEGDDGDMG
DATEVSKAEESEEEDSDTPSQQDKKRRKKEDGTGPVMTDTFQTATSREVAGAATLIPQDS
SLVLSHNIQHQVALPPDLDYEYVPLSEHKSPDEPARTWNFKLDPFQSLSVASIERDESIL
VSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSPIKALSNQKYRDFEAIFGDVGLMTGDVTI
NPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIIMLPDKVR
YVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFYPSGGKGARIVVDEKGNF
NEHNFNLVMKEIEDKKGAGSNDINAKQRGKGKNKKINKGGVDEGSDIHKIIRMTIKKKFN
PVIVFNFSKAECENMALNISSLSFNDDSEKAMVRKVFHSAIESLSEQDRELPQIKNLLPL
LERGVGVHHSGLLPILKETIEILFQESLLKVLVATETFSIGLNMPAKTVVFTQVTKWDGV
KRRPITSSEYIQMAGRAGRRGLDARGVVIMMIDDKLEPDTAKGIVTGHQDKLNSAFYLGY
NMILNLLRIEAISPEFMLERCFHQFQNAASVPSLEKELMSLQQERDGLSIPDEATIKDYY
QIRQQLNSYTEDMRAVIQQPTHCIEFLQPGRLVQIYNPKEAHDNVTGGLDFGWGVIVNHY
PRRAPRLGEPEWEPQESHIIDVMLPISASSADITPGQPTGAMPPGLKPAGADTADTATIN
VVIPCLLTCMKAISQIRIFMPKDGLKADADKDQARKSLAEVKRRFTDGIPILDPLENMEI
VDDSFKKLLRKIEVLESRLLANPLHMSPMLPSLWDQYSEKVQLIDKVKEKKKAISKAHSI
AQMDELKSRKRVLRRLGFINESEVVQLKARVACEISSTEGHELLLSELLFDRFFNELSPE
TCAAVLSCFIFDEKVETQALKEDLQKPYREIQAKARIIAKVSQECKLDVNEEEYVTSLKW
QLMETVYAWAQGRPFIEICKMTKTYEGSLIRLFRRLEELLRQMGEAAKVMGNEDLVKKFD
ESLQKIRRDIVAAQSLYL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgagttgtttgatgtttttgacggccaggccggagcccagagcgctagcgattcc
gaaagagagcctcaaacgtctcgagcccgcgacaagagcaagaagcgtaaggcggatgag
gccatgaatggcactgcggctgtggaaaccccaaaggaaggcgatgatggtgatatgggc
gacgctaccgaggtatccaaggcggaggagtccgaggaggaggattcagatacccccagc
caacaagacaaaaagagacgaaagaaggaggatggtaccgggcctgttatgacggatacg
tttcaaacagccacgtcaagagaagtcgctggtgcggcaactctgataccgcaggattcg
tccttggttttgtcgcataacattcagcaccaagttgctttgccacccgatctggactac
gaatacgttcccctgtcggagcacaagtcgcctgacgagcctgcgagaacatggaatttc
aagctggaccctttccaaagcttgtcggtggcgtcaattgaacgggatgaaagtattctt
gtgtcggctcacacttctgctggcaaaacagttgttgctgaatacgccgtggcgcaatgt
ttgaagcgcaaccagcgagtcatctacaccagtcccatcaaggcgcttagcaatcaaaaa
tatagagatttcgaggcaatctttggagatgtcggtctgatgactggtgatgttacaatc
aaccccacggcgagctgcttggtcatgactactgaaattctgcgatctatgttataccgt
ggctcagagattatgcgagaagtcgcctgggttgttttcgacgagattcactatatgcga
gacaagactcgaggtgttgtgtgggaggagaccataatcatgcttcccgacaaggttcga
tacgtctttttgtccgccaccatccccaatgcctttcagtttgccgagtggattgccaag
attcatcaccaggcttgccacgtcgtgtacacagacttccgacccacgcctctgcagaat
tacttttacccctctggcggcaagggcgcgcgaattgtggtcgatgagaagggcaacttc
aatgagcacaactttaatctcgttatgaaagagattgaggataagaagggtgccggctcc
aatgacatcaacgcgaagcaaaggggcaagggcaagaacaagaagatcaacaagggcggt
gtggacgaaggttccgacatacacaagatcattcgtatgaccatcaagaagaagtttaac
cctgtcattgtgttcaatttcagcaaggcagagtgcgagaatatggccttgaatatttcc
agcctgtcgttcaatgacgattccgaaaaggccatggtgaggaaggtttttcacagcgcc
attgagagtttgtcggagcaagatcgagaactgcctcaaatcaagaacttgcttcctctt
ctggagcgaggcgttggcgtgcatcactcaggtttgctgccgattctaaaggaaaccatt
gagattttgtttcaagagtctcttcttaaagttctcgttgccaccgagaccttctccatt
ggattaaacatgcctgccaaaacggtcgtcttcacccaagtcaccaaatgggatggtgtc
aagagacggcctatcacgtcgtccgagtacattcagatggcgggtcgtgctggacgtcgt
ggtctcgatgctcgcggtgtggtcatcatgatgattgacgacaagcttgaaccggatacc
gccaagggtattgtgacgggtcaccaggataagctcaattccgcattttacctaggatac
aacatgattctcaacctgctgcgaattgaggcgatttcacccgaatttatgcttgaaagg
tgcttccatcagttccagaatgccgccagcgtcccctcgttggagaaggaactgatgtcg
ctgcaacaagagcgagacggactctccatacccgacgaggcgacaatcaaggattactac
cagattcgacagcaactcaactcgtatactgaagacatgcgggccgtcatccagcagccc
acccactgcatagagtttcttcagccaggacgcctggtgcagatatacaaccccaaggaa
gctcatgataacgttacaggaggcctcgactttggatggggtgtcatcgtcaatcactat
cctcgacgggcgcccagacttggtgaacccgagtgggaaccgcaggaatcgcacatcatt
gatgttatgctacctatttcggcatcaagtgccgacattactcctggccagccgactgga
gccatgccgcctggcctcaaacctgctggcgcagacaccgcagacactgctacaatcaat
gtggtaataccctgcctacttacgtgcatgaaagccatcagtcagatccgcatcttcatg
cccaaggatggtctgaaggccgatgcggacaaagaccaagcacgcaagtcattggcagag
gttaagcgccggttcaccgacggcatccccattttggaccccctggagaacatggagatt
gtcgacgactcgtttaagaaactcctgcgcaagattgaggtgctcgagtcccgactcctc
gccaaccccttgcacatgtcgcccatgctcccgtccctctgggaccagtacagcgaaaag
gtgcagctcatagataaagtcaaggagaagaagaaggctatttccaaagcccatagtatc
gcgcaaatggacgaactcaagtcgcgcaagcgtgttctccgcagactaggtttcatcaac
gagtcggaagtggtgcagctcaaggcgcgcgttgcctgcgagatctcgtccaccgagggc
cacgagctgctgctctcggagctcctgtttgaccgcttcttcaacgaactgtcccccgag
acgtgcgccgccgtcctcagctgcttcatctttgacgaaaaggtggagacgcaagctctc
aaggaggacctgcagaagccgtaccgcgagatccaggccaaggcgcgcatcattgccaag
gtcagccaggagtgcaagctcgatgtcaacgaggaggaatacgtgacgagtctcaagtgg
cagttgatggagacggtctacgcctgggctcagggcaggccgtttatcgagatttgcaaa
atgacaaaaacctacgaaggctcgctgattcgtctcttccgacgactggaagaattgctg
cgtcagatgggggaggcagccaaggtcatgggcaatgaggatcttgtgaagaagtttgac
gagagtttgcagaagattaggagggacattgtggctgcgcagagcttgtacctttaa
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