Metarhizium brunneum: 26245606
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Entry
26245606 CDS
T10216
Symbol
SUB2, G6M90_00g090860
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mbrn Metarhizium brunneum
Pathway
mbrn03013
Nucleocytoplasmic transport
mbrn03015
mRNA surveillance pathway
mbrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
26245606 (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
26245606 (SUB2)
03015 mRNA surveillance pathway
26245606 (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrn03019
]
26245606 (SUB2)
03041 Spliceosome [BR:
mbrn03041
]
26245606 (SUB2)
Enzymes [BR:
mbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
26245606 (SUB2)
Messenger RNA biogenesis [BR:
mbrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
26245606 (SUB2)
Spliceosome [BR:
mbrn03041
]
Complex C
Other components
EJC/TREX
26245606 (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
26245606 (SUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4844
DUF6066
Motif
Other DBs
NCBI-GeneID:
26245606
NCBI-ProteinID:
XP_014541743
UniProt:
A0A7D5V1P8
LinkDB
All DBs
Position
5:complement(join(3359078..3359126,3359183..3359440,3359511..3359871,3359931..3360341,3360956..3361181))
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AA seq
434 aa
AA seq
DB search
MSHEEDLIDYSDEEIGANETAAAGSNGKKGELAASTDVDKKGSYVGIHSTGFRDFLLKPE
LLRAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVS
VVVMCHTRELAYQIRDEYNRFSKYMPDIKTGVFFGGTPIKTDMETLKNKDTCPHIIVGTP
GRLKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPTQKQVMMFSATLAN
EIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDELQFNQVIIF
VKSTIRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFKKRICVATDVFGRGIDI
ERINLAINYDLPADASSYLHRVGRAGRFGTKGLAISFVSSDQDQDVLKEIEKRFEVALPE
FPKEGVDASTYMAS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaggaggatctcatcgactactctgatgaggaaattggcgccaacgagacc
gccgccgccggctccaacggcaagaaaggcgaactcgctgcctctaccgatgtcgacaag
aagggcagttatgttggtattcactcgaccggcttccgcgacttcttgctgaagcctgag
ctcctccgtgctatcggcgactgtggtttcgagcatccatcggaggtccaacaaacctgt
atccctcaggcgctcctcggtggtgatattatttgccaggccaagtccggtctgggcaag
acggctgtcttcgtccttgctacgttgcagcaggtcgagcccgtcaacggagaagtttca
gttgtggttatgtgccacacccgtgaacttgcctaccagattcgcgatgagtacaaccga
ttcagcaagtacatgcccgacatcaagactggcgtgttctttggtggcactcccatcaag
accgacatggagaccttgaagaacaaggacacctgcccccacattatcgttggtactcca
ggtcgtctcaaggctcttgtccgcgacaaggctctacgcctcggcagtgttcgcatcttt
gttcttgatgaatgcgacaagatgcttgatcagcctgacatgcgtactgatgtccaggat
gtcttccgcgccactcctacccagaagcaggtcatgatgttctctgctactttggctaat
gagatcaagcccatctgcaggaagttcatgcagaaccccaccgagcactatgtcgatgag
gacaccaagctcactctgcatggtcttcagcagtactacatcaagctcgaagagaaggaa
aagaacagaaagctgaacgagcttctcgacgaactccaattcaaccaggtcatcatcttc
gtcaagagcaccattcgtgccaccgagcttgacaagttgctgcgcgaatgcaacttccct
tcgattgcggtgcactctggtgtgagccaggaggagcgtatcaaacgttacaaggagttc
aaggagttcaagaagagaatttgcgttgccacggacgtttttggtcgtggtattgatatt
gaacgtatcaacctggcgatcaactacgatctccctgccgatgctagttcgtacctccac
cgtgtcggtcgtgccggccgtttcggtaccaagggtcttgccatctcgtttgtcagttca
gaccaagaccaagacgtgctcaaggagattgagaagcggttcgaagttgccctacctgaa
tttcccaaggagggtgtcgatgccagcacatatatggcttcgtaa
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