Macrococcus brunensis: MGG13_09770
Help
Entry
MGG13_09770 CDS
T08179
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mbru
Macrococcus brunensis
Pathway
mbru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG13_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbru03019
]
MGG13_09770
03009 Ribosome biogenesis [BR:
mbru03009
]
MGG13_09770
Enzymes [BR:
mbru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MGG13_09770
Messenger RNA biogenesis [BR:
mbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MGG13_09770
Ribosome biogenesis [BR:
mbru03009
]
Prokaryotic type
rRNA helicases
MGG13_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_30
STI1-HOP_DP
Cas3-like_C_2
Flavi_DEAD
GerD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ULG73922
LinkDB
All DBs
Position
complement(1845017..1846498)
Genome browser
AA seq
493 aa
AA seq
DB search
MQKFRDLGISEPTIQSLEKLGFTEPTAIQTESIPYTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVKQHEGIQSLILAPTRELAVQVADQLKAFSRGQGVQVVTVFGGMPIDRQIRELKRKP
QIVVGTPGRVIDHLNRRTLKTEQMTTLILDEADEMMNMGFIDDMRFIMDKLPKENRQTLL
FSATMPKAIQELVQKFMKDPVVVKTMTNVDSNPDIDEFYTIVKELEKFDTFTNFLDVHSP
DLAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDSIDILVATDVA
ARGLDISGVSHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPIEMDYIRQIEKEKN
RTMKALRPPTPGEVMKSRESDVKKKVAEWVAKPSEERIETIAQGLIEEYGDVKLVTSLLQ
ELIQSNNDVDVQLTFEKPLGRKGGKSSYGRRGGNGGGGNRNFKNRDSKDNRRRKPAAGKS
KNFKGRTFADHKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacttaggtattagcgaacctacaatccaatcgctagagaagtta
ggttttacagaacctacagcgatccagactgaaagtattccatatactatggctggcaga
gatgtattaggacaagcgcagaccggcacaggtaaaacaggtgcattcggtataccttta
attgagaaagtgaagcagcacgaaggcattcagagtttaatactcgcgcctactcgtgaa
ctggctgtacaagtagcagaccagttaaaagcattcagccgtggacaaggtgttcaggtt
gtgactgtattcggcggtatgccgatcgaccgtcagattcgtgaattaaaaagaaaacct
caaatcgtagtcggtacaccaggacgtgttatcgaccacttaaaccgtcgtacactgaaa
acagaacagatgacgacactgattcttgatgaagcagatgaaatgatgaacatgggcttc
atcgatgatatgcgttttatcatggataaattaccgaaagagaatcgtcagacgttatta
ttctcagcgacaatgcctaaagccattcaggaacttgttcagaagttcatgaaggaccca
gttgttgttaagacaatgacaaacgttgattctaatccggatatcgacgaattctataca
atcgtcaaagaacttgagaaatttgatacatttacgaatttccttgatgttcacagcccg
gaccttgcgattgtcttcggtcgtactaaacgacgtgtagatgagctgacaagtgcactg
atctctaaaggttaccgtgcagaaggtcttcatggtgatatcacacaggcgaaacgtctt
gaagtactgaaaaaattcaagaatgattctatcgatatccttgtcgcaacagatgttgca
gcacgtggattagatatttcaggcgtttcacacgtttataacttcgatatccctcaggac
gttgaaagttatacacaccgtatcggacgtacaggccgtgcaggtaaacatggtatggcg
atttcattcgtcaacccgattgaaatggattatatccgtcagatcgaaaaagagaaaaat
cgtacgatgaaagctcttcgtccacctacaccaggtgaagtcatgaaatcacgtgagagc
gacgttaagaaaaaagtagcggaatgggtagctaaaccatctgaagaacgtattgaaaca
atcgcgcaaggtctgattgaagaatacggcgatgttaaattagtgacatcattactgcag
gaactgattcaatctaacaatgatgttgatgttcaactgacattcgaaaaaccgcttggc
cgtaaaggtggcaaatcatcttatggtcgtcgtggtggtaacggtggcggtggtaaccgt
aacttcaaaaaccgtgattctaaagataaccgccgtcgtaaaccggcagcaggtaaatct
aagaacttcaaagggcgtacattcgctgatcacaagaaataa
DBGET
integrated database retrieval system
