Macrococcus brunensis: MGG13_10580
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Entry
MGG13_10580 CDS
T08179
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mbru
Macrococcus brunensis
Pathway
mbru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGG13_10580 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbru03021
]
MGG13_10580 (rpoB)
03400 DNA repair and recombination proteins [BR:
mbru03400
]
MGG13_10580 (rpoB)
Enzymes [BR:
mbru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGG13_10580 (rpoB)
Transcription machinery [BR:
mbru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MGG13_10580 (rpoB)
DNA repair and recombination proteins [BR:
mbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MGG13_10580 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ULG74077
LinkDB
All DBs
Position
complement(1997619..2001158)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTGQLIQYGRHRQRRSYARISEILELPNLIEIQTKSYEWFLEEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLDEAKNRDATYSAPLRVKVRLIIKETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNDKVDKNGKVSFGATVIPNRGAWLEYETDAKDIV
FVRIDRTRKLPITVLLRALGFSSDQEIIDLLGDNEYLRNALDKDNTDSVESALLEIYERL
RPGEPPTVDNARSLLYSRFFDPKRYDLASVGRYKMNKKLHLKHRLFNQTLAEPIVDIETG
EIVAEEGTLLDRRNLDQIIDVLENNANLKVYELENGLLDEPIEIQSVKVYIPGDEEKRTT
TIIGNAFPDDEVKSITPADIISSISYFFNLLHGVGFTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTESITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDIEANRVTDQIDYLTADEEDAYVVAQANSRLDDEGHFLDDEVVCRFRGDNT
KMARTRMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTG
MEHVAARDSGAAVVAKYKGRVEHVEARKIKIRRIVEEGGKEIETDLDTYKLSKFARSNSG
TCYNQRPIVAVGDVVTKGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSDNALKNLDDRGIIYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREDGDEL
SPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISRILPEEDMPFMPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAAKNLGLHVASPVFDGANDEDVWSTIEEAGMARDGKTVLYDGR
TGEPFDNRVSVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENIPKPGVPESFRVLMKELQSLGLD
VKVMDNKDEEIEMRDLEDDDYADTKINLNMPQETEVTEK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttatccagtacggaagacatcgtcagcgtagaagttacgcgcgtatc
tccgaaattttagaattaccgaacttaatcgagattcaaacgaaatcttatgagtggttc
cttgaagaaggacttcttgaaatgttccgagacatttctccaattgaagacttcacaggc
aatctgtcattagagtttgtagactatagacttggcgaacctaaatatgacttagatgaa
gcgaaaaaccgtgatgcgacttattctgcgccgctccgcgttaaagttcgtctgatcatt
aaagaaacaggagaagtaaaagagcaggaagtattcatgggtgatttcccactgatgact
gatacaggaacgttcgttatcaatggtgcagaacgtgttatcgtatctcagcttgtccgc
tcaccatctgtttacttcaatgataaagtagataaaaacggtaaagtaagtttcggtgca
actgtcattcctaaccgtggtgcttggcttgaatatgaaacagatgcgaaagatatcgtc
tttgttcgtattgaccgcacacgtaagttacctattactgtccttttacgtgcattaggt
ttctcaagtgatcaggagatcatagacttattaggcgataacgaatacttacgcaatgcg
cttgataaagataatactgattcagttgagtctgccttacttgaaatctacgaacgtctt
cgcccgggcgaaccacctacagtagataatgcgagaagcttactgtattctcgtttcttc
gacccaaaacgctatgatttagcgagcgttggtcgctataaaatgaacaaaaaacttcat
cttaagcatcgtctgttcaaccagacacttgctgaaccgattgtagatatcgaaacaggc
gagattgtggctgaagaaggtacacttcttgatcgtcgtaacctcgatcagattattgat
gtacttgaaaacaatgccaacctcaaagtttatgaacttgagaatggtctgttagatgag
ccgattgaaatccagtcagttaaagtctatatccctggtgatgaagaaaaacgtacgacg
accatcatcggtaatgcgttcccggatgatgaagtgaaaagtatcacacctgctgatatt
atttcttcaatcagctatttcttcaacttattacacggtgtcggtttcactgatgatatc
gaccacttaggtaaccgtcgtcttcgttcagttggcgaattactgcagaaccagttccgt
attggtctctctcgtatggagcgtgttgtacgtgaacgtatgagtattcaggatactgaa
tctatcacaccacagcagctcatcaacatccgtccagtgattgcttctatcaaagaattc
tttggtagttctcagttatcacagttcatggaccaggcaaacccgttagcagagttaacg
cataaacgtcgtctttctgcattaggacccggtggtttaacacgtgagcgtgctggtatg
gaagtccgtgacgttcactattctcactatggtcgtatgtgtccgattgaaacaccagag
ggtccgaatatcgggctgatcaactctttatcttcttatgcgcgtgtcaatgagttcggt
ttcattgaaacaccgtatcgtaaagtagatatcgaagcgaatcgtgtaacagatcagatt
gactacttaacagcagacgaagaagatgcttacgttgtggcacaggcgaactcacgtctt
gatgacgaaggtcatttccttgatgatgaagttgtctgccgtttccgcggagataacaca
aaaatggctcgtactcgcatggattacatggacgtatcacctaaacaggttgtatcagca
gcgacagcatgtattccgttcttagaaaacgatgactctaaccgtgccttaatgggagcg
aacatgcaacgtcaagcagtgccgttaatgaatccggaagcaccatttgtcggaacaggt
atggaacacgtagcagcccgtgactcaggtgcggcagttgttgcgaagtataaaggacgt
gttgaacacgttgaagcccgtaaaatcaaaatccgtcgtatcgtagaagaaggcggtaaa
gaaatcgaaacagatttagatacttacaaattatctaagtttgctcgttcaaactcaggt
acatgttacaaccagcgccctatcgtagcagtaggcgacgtcgtaacgaaaggtgaaatc
ttagcagatggtccttctatggaacttggcgagatggcacttggacgtaacgtcgtagtc
ggtttcatgacttgggacggttataactacgaggatgctgttatcatgagcgagcgtctt
gtaaaagacgacgtttatacttctatccatattgaagaatatgaatcagaagcgcgtgac
actaaactcggacctgaagaaatcacacgtgatattccaaacgtttctgataatgcactt
aaaaacttagatgatcgcggtatcatttatgttggtgctgaagttaaagatggtgatatc
ttagtgggtaaagtaacgcctaaaggtgtgactgaattaacagctgaggaacgtttatta
catgcgatcttcggtgaaaaagcccgcgaagtccgcgatacttcattacgtgtgcctcac
ggtgccggcggtatcgtgcttgacgttaaagtcttcaatcgtgaagatggcgatgaatta
tctcctggtgttaaccagttagttcgtgtttatatcgttcaaaaacgtaaaatccacgtt
ggggataaaatgtgtggtcgtcacggtaataaaggggttatctcccgtatcttacctgaa
gaggacatgccgtttatgccagacggtacaccgattgacatcatgcttaacccacttggg
gtaccatcacgtatgaatatcggacaagtacttgaattacatttaggtatggctgcgaaa
aacttaggtcttcacgttgcttcaccagtattcgatggtgcgaacgatgaagacgtatgg
tcaacaatcgaagaagcaggcatggcacgtgacggtaaaaccgttctttacgatggccgt
acaggtgaaccattcgataaccgtgtttctgtaggtgttatgtacatgctgaaacttgct
cacatggtagatgacaaacttcacgcacgttctactggaccatactcacttgttacgcag
caaccgctgggtggtaaagcgcagttcggtggacaacgtttcggtgagatggaagtatgg
gcactggaagcatacggtgctgcttacacattacaggaaatcctgacttacaaatcagat
gatacagtcggccgtgtgaaaacttacgaagcgatcgttaaaggtgagaacattccgaaa
ccaggtgttccagaatcattccgcgtattaatgaaagagcttcaaagtttaggactcgac
gttaaagtaatggataacaaagacgaagaaatcgaaatgcgtgaccttgaggatgacgat
tatgctgatacaaaaatcaacttaaacatgcctcaggaaactgaagtgactgagaagtaa
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