Methylocystis bryophila: B1812_05975
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Entry
B1812_05975 CDS
T04837
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mbry
Methylocystis bryophila
Pathway
mbry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1812_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbry03021
]
B1812_05975
03400 DNA repair and recombination proteins [BR:
mbry03400
]
B1812_05975
Enzymes [BR:
mbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1812_05975
Transcription machinery [BR:
mbry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1812_05975
DNA repair and recombination proteins [BR:
mbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1812_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Raco_middle
Motif
Other DBs
NCBI-ProteinID:
ARN83427
UniProt:
A0A1W6N0U3
LinkDB
All DBs
Position
1278666..1282877
Genome browser
AA seq
1403 aa
AA seq
DB search
MNLFSPVAATQAFDQIQISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGP
IKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRDRMGHISLAAPVAHIWFLKSLPSRI
GLLLDMTLKDLERILYFESYIVIDKGLTDLKDRQLLTEDEYLQAQDKYGQDCFTAMIGAE
AIRKLLESMDLESIAASLRQEIAEATTDLKPKKLAKRLKIIEAFIQSGNKPEWMVLKEIP
VIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQEAV
DALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKL
HQCGLPKKMALELFKPFIYSRLDAKGFSATVKQAKKLVEKEKPEVWDILDEVIREHPVLL
NRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVL
MMSTNNILHPANGQPIIVPSQDIVLGLYYLTLERDGEPGQYREDPKTKAPLSGIFANMGE
IEHALASGAVTLHAKVKGRAWTFDANGKRVSKIFNTTPGRMILGQLLPDHVKIPFDVANK
LMTKKEISNMIDTVYRNCGQKETVIFCDRIMSLGFREAFKAGISFGKDDMIVPETKERIV
GETRAAAKEYEQQYNDGLITQGEKYNKVVDAWGKCSEKLAEEMMSRISSVRKDEHGRDLP
INSIYMMSHSGARGSPAQMRQLAAMRGLMTKPSGEIIESPIISNFKEGLTVLEYFNSTHG
ARKGLADTALKTANSGYLTRRLVDVAQDSIISSKDCGSKNGIRMRAIIDAGQVVASLAMR
ILGRTAAEDLRAPDGRVIVPAGEMIQEWHLEPITAAGIQEVKIRSVLTCEAKEGVCAACY
GRDLARGVPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLADQSFFESNFDGKVHV
RNRHVARNSDGDLMVMARNVAVVILGPDGTERSVTRVQYGARLKVDEGDTVKRGQRVAEW
DPYTRPILTEVDGVVGFEDLVEGQSMAESADESTGITKRMVMDWRLNLRSASLKPSISVK
GADGKIIKLQRGGDARYALPVDSIIAVEPGQKVTAGDILARISLESAKTRDITGGLPRVA
ELFEARRPKDHAIIAEISGTVQFGKDYKNKQRVSIIPHEDGADPVEYLIPKGKHIHLQDG
DVVEKGDYIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQML
QKVDIVDPGDTGFLEGEQVDEMELEEANAKAQEEGTKPATGTPVLLGITKASLQTRSFFS
AASFQETTRVLTEAAVNGKVDPLVGLKENVIVGRLIPAGTGAAMAKFRHLATSRDDLIIA
QRAETSEAKAAQQAPALPPVPVE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcagtccggtcgcggccacgcaggccttcgatcagattcagatttcgatc
gcgagccccgaaaagatcctgtcctggtcatacggcgagatcaagaagcccgagaccatc
aactatcgcaccttcaagccggagcgcgacgggctgttctgcgcccgcatcttcggcccg
atcaaggactatgagtgcttgtgcggcaagtacaagcgcatgaaatacaagggcgtcatc
tgcgagaagtgcggcgtcgaggtcacgctcgcgcgcgttcgccgcgatcgcatgggccac
atctcgctcgccgcgcccgtcgcgcacatctggtttctgaagtcgctgccgtcgcgcatc
ggccttctgctcgacatgacgctgaaggatctcgagcgcattctctatttcgagtcctac
atcgtcatcgacaagggactgaccgacctcaaggaccgtcagctcctcaccgaggatgaa
tatctgcaggcccaggacaaatatggccaggactgcttcaccgcgatgatcggcgccgag
gcgatccgcaagctgctcgagtccatggacctcgagagcatcgcggcgagcctgcgccag
gagatcgccgaggcgacgacggacctgaagcccaagaagctcgccaagcgtctcaagatc
atcgaggccttcatccaatccggcaataagccggagtggatggtgctgaaggaaattccg
gtcattccgccggatctgcggccgctcgtgccgctcgacggcgggcgcttcgcgacctcg
gatctcaacgatctctaccgccgcgtcatcaaccgcaacaaccgcctgaagcggctcatt
gagctgcgcgcgccggacatcatcatccgcaacgagaagcgcatgctgcaggaggcggtc
gacgcgctgttcgacaacggccgccgcggccgcgtcatcacgggcgcgaataagcgcccg
ctgaagtcgctcgccgatatgctcaagggcaagcagggccggttccgccagaatcttctc
ggcaagcgcgtcgactattcgggccgctccgtcatcgtcgtgggcccggagctcaagctg
catcaatgcggcctgcccaagaagatggcgctcgagctcttcaagcccttcatctattcg
cgtctcgacgccaagggcttttcggccaccgtcaagcaagcgaagaagctcgtcgaaaag
gagaagcccgaggtctgggacattctcgacgaggtcatccgcgagcacccggtcctgctc
aatcgcgccccgaccttgcatcgtctcggcatccaggccttcgagcccgtgctgatcgaa
ggcaaggccatccagctgcatccgctcgtctgcgcggctttcaacgccgatttcgacggc
gaccagatggccgtgcacgtgccgctgtcgctcgaggcgcagctcgaggcgcgcgtgctg
atgatgtcgaccaacaacatcctgcatccggccaatggtcagccgatcatcgtgccgagt
caggacatcgtgctcggcctttactatctcacgctcgaacgtgacggcgagccggggcaa
tatcgcgaggatcccaagaccaaggccccgctctccggcatcttcgccaatatgggcgag
atcgagcacgctttggcctcgggcgccgtgacgttgcacgccaaggtcaagggtcgcgcc
tggacctttgacgcgaacggcaagcgcgtctccaagatcttcaacacgacgcccggtcgc
atgatcttgggccagctgctgcccgaccatgtcaaaattcccttcgacgtcgccaacaag
ctgatgacgaagaaggaaatctccaacatgatcgacaccgtctaccgcaattgcgggcag
aaggagacggtgatcttctgcgaccgcatcatgtcgctcggcttccgcgaggcgttcaag
gcgggcatctcgttcggcaaggacgacatgatcgtgccggagacgaaggagcgcatcgtc
ggtgagacgcgcgcggccgccaaggaatatgagcagcagtacaacgacggtctgatcacc
cagggcgagaaatacaacaaggtcgtcgacgcctggggcaaatgctcggagaagctcgcc
gaggagatgatgagccgcatctcgtcggtgcgtaaggacgagcacggccgcgatctgcca
atcaactcgatctacatgatgtcgcattccggcgcgcgcggctcgcccgcgcagatgcgc
cagctcgcggcgatgcgcggcctgatgaccaagccctcgggcgagatcatcgagagcccg
atcatctcgaacttcaaggaaggcctcacggttctcgaatacttcaactccacgcacggc
gcccgcaagggtctcgccgacacggcgttgaagaccgcgaactcgggctatctgacccgc
cgcctcgtcgacgtggcgcaggactcgatcatctcgtcgaaggattgcggctccaagaac
ggcatccgcatgcgcgcgatcatcgacgcgggccaagtggtcgcttcgctcgccatgcgc
attctcggacgcaccgcggccgaggacttgcgcgcgccggacggcagggtgatcgtcccc
gccggcgagatgatccaggaatggcacctcgagccgatcaccgcggcgggcattcaggag
gtgaagatccgctcggtgctgacctgcgaggccaaggaaggcgtgtgcgcggcctgctac
ggtcgcgacttggcgcgcggcgtgccggtcaacatgggtgaggccgtcggcgtcatcgcc
gcgcagtcgatcggcgagccgggcacgcagctcaccatgcgcaccttccacatcggcggc
gcggcgcagctcgccgaccagtcgttcttcgaatcgaatttcgatggcaaggtgcatgtg
cgcaaccgccacgtcgcgcgcaactccgacggcgatctgatggtcatggcgagaaacgtc
gccgtggtgatcctcggacccgacggaacggagcgctcggtcacccgcgtccaatatggc
gcgcggctcaaggtcgacgagggcgatacggtcaagcgcggccagcgcgtcgccgaatgg
gacccctacacccggccgatcctgaccgaggtcgacggcgtcgtgggctttgaggatctg
gtcgaaggccaatcgatggcggagtcggccgacgaatcgaccggcatcaccaagcgcatg
gtcatggactggcgcctcaatctgcgctcggcgagcctcaagccctcgatctcggtcaag
ggcgcggacgggaagatcatcaagctgcagcgcggcggcgacgcccgctatgccctaccc
gtcgactcgatcatcgccgtcgagccggggcagaaggtgacggcgggcgacattctcgcg
cgtatctcgctcgagagcgccaagacacgcgacatcaccggcggtctgccgcgcgtcgcc
gaactcttcgaggcgcgccggccgaaggatcacgcgatcatcgcggaaatctccggcacc
gtgcagttcggcaaggactacaagaacaagcagcgcgtctcgatcatcccgcatgaggac
ggcgccgatcccgtcgaatatctcatcccgaagggcaagcacatccatctgcaggatggc
gacgtcgtcgagaagggagactacatcgtcgacggcaatccggcgccgcacgacattctg
gcgatcaagggcgtcgaggagcttgcggcctatctcgtcaatgagatccaggaggtctat
cgcctgcaaggcgtcaacatcaacgacaagcacatcgaggtgatcgtgcgtcagatgttg
cagaaggtcgatatcgtcgatcccggcgacaccggcttcctcgaaggcgagcaggtcgac
gagatggagctcgaggaggcgaacgccaaggcgcaggaagagggcacgaagcccgcgacc
ggcacgccggtgctgctcggcatcaccaaggcctcgctgcagacgcgctccttcttctcg
gcggcgtccttccaggagaccacgcgcgtcctgaccgaagccgccgtcaacggcaaggtc
gacccgctcgtgggcctcaaggagaatgtcattgtcggccggctgatcccggcgggcacc
ggcgcggcgatggcgaagttccgccatctcgcgacgagccgcgacgacctgatcatcgcc
cagcgcgccgaaaccagcgaagccaaggcggcgcagcaggcgccggcgcttccccccgtg
ccggtggaataa
DBGET
integrated database retrieval system
