Methylocystis bryophila: B1812_06055
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Entry
B1812_06055 CDS
T04837
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mbry
Methylocystis bryophila
Pathway
mbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1812_06055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbry03400
]
B1812_06055
Enzymes [BR:
mbry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1812_06055
DNA repair and recombination proteins [BR:
mbry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1812_06055
RecFOR pathway proteins
B1812_06055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_17
AAA_3
AAA_2
AAA_22
AAA_16
AAA_14
AAA_18
ResIII
Rad17
nSTAND3
AAA_33
TsaE
ABC_tran
DUF815
AAA_28
RNA_helicase
NB-ARC
NTPase_1
NACHT
MCM
AAA_24
IstB_IS21
AAA_7
Sigma54_activ_2
Cytidylate_kin
AAA_19
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ARN80707
UniProt:
A0A1W6MT12
LinkDB
All DBs
Position
1296323..1297369
Genome browser
AA seq
348 aa
AA seq
DB search
MATPPRRLLTPEKREDDREDASIRPLALEDFTGQQAARNNLKVFIEAAKARGDALDHVLF
VGPPGLGKTTLAQIIARELGVNFRSTSGPVIAKAGDLAAQLTNLEPRDVLFIDEIHRLNP
AVEEILYPAMEDFQLDLIIGEGPAARSVKIDLARFTLVGATTRAGLLTTPLRDRFGIPVR
LNFYTVEELETIVTRGARVLKIAMNESGAREIARRSRGTPRIAGRLLRRVRDFAIVEGAA
EITRELAARTLTLLEVDDIGLDVMDRRYLDMVAVNFSGGPVGIETIAAALAEPRDAIEDI
IEPYLLQQGFLQRTPRGRVLTAAAFRHLGLAPPTAAPSQPGLFGESEP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgccgccccgtcgcctgctgacgcccgaaaagcgagaagacgaccgcgaggac
gcgtcaatccgcccgctcgcgctcgaggatttcaccggacagcaggcggcgcgcaacaat
ctgaaagttttcatcgaggcggccaaggcgcgcggcgacgcgctcgatcacgtcctcttc
gtcggccctcccggcctgggcaagaccacgctggcgcagatcatcgcgcgcgagctcggc
gtcaactttcgctcgacctccggtcccgtcatcgccaaagcaggcgatctcgccgcgcag
ctcaccaatctcgaaccgcgcgacgtgctcttcatcgacgagatccatcgcctcaacccg
gcggtggaggaaatcctctacccggcgatggaggattttcagctcgatcttatcattggc
gaaggaccggcggcgcgctccgtcaagatcgacctcgcgcgcttcacgctcgtcggcgcg
acgacccgcgccggcctgctaaccacgcccttgcgcgaccgtttcggcattcctgtgcgg
ctcaatttctacacggtggaggagctcgagacgatcgtcacacgcggcgcgcgcgtgctc
aaaatcgccatgaacgagagcggcgcgcgcgagatcgcgcggcgctcgcgcggcacgccg
cgcatcgccggccgcctattgcgccgcgtgcgcgacttcgcgatcgtcgaaggcgccgcc
gagatcacgcgcgagctcgccgcgcggacgctgacgctgctcgaggtcgacgacatcggc
ctcgatgtgatggaccggcgctatctcgacatggtcgcggtgaatttctcgggcgggccg
gtcgggatcgagaccatcgccgcggcgctcgcggagccgcgcgacgcgatcgaggacatc
atcgagccctatcttctgcagcagggctttttgcagcgaacgccgcgcggccgcgtgctc
accgccgcagccttccgacatttggggctcgcgccgccgaccgccgccccatcccagcca
gggctctttggagaaagcgagccgtaa
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