Methylocystis bryophila: B1812_06275
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Entry
B1812_06275 CDS
T04837
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mbry
Methylocystis bryophila
Pathway
mbry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1812_06275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbry03019
]
B1812_06275
03016 Transfer RNA biogenesis [BR:
mbry03016
]
B1812_06275
Enzymes [BR:
mbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B1812_06275
Messenger RNA biogenesis [BR:
mbry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1812_06275
Transfer RNA biogenesis [BR:
mbry03016
]
Prokaryotic type
tRNA degradation factors
B1812_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF7909
Motif
Other DBs
NCBI-ProteinID:
ARN80744
UniProt:
A0A1W6MT27
LinkDB
All DBs
Position
1331096..1333249
Genome browser
AA seq
717 aa
AA seq
DB search
MFEIHREEIDWAGRKLVLETGKIARQADGAVLATWGETTVLATVVSAKSAKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLVSRLIDRPIRPLFVDGYKNETQVILTVLSH
DLENDPDVLAMVAASAALTLSGVPFMGPIGGARVGHINGALKVNPTIEEMKNSTLDLVVA
GTADAVLMVESEAKELSEETMLEAVMTGHRGFQPVIDAIIRLAERAAKEPRDFSPPAKEE
VAAAVAKIGEAELREAYKITVKQQRYATVDAVKAKVFAALAPEGAEAKFSKEQIDEAFHD
LQAKVVRWNILDDGLRIDGRDVKTVRPIVSEVGILPRAHGSALFTRGETQALVVATLGTG
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPVLPAPA
EFPYTLRLVSEITESNGSSSMATVCGSSLALMDAGVPMKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTSEGVTSLQMDIKIAGITEEIMRVALAQARDGRMHILGEMSK
ALSSSRAELGEFAPRIETLKIPTEKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDSNSIKAAINWIKSIASDPEVGQIYEGTVVKTAEFGAFVNFFGSKDGLVHISQLAATRV
AKTTDVVKEGDKVKVKLLGFDDRGKVRLSMRAVDQTTGEDIEAKAAKSDGTGAQPQV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatccatcgcgaagagatcgattgggccgggcgcaagctcgtgctggagacc
ggcaagatcgcccgccaagccgatggcgcagtgctcgcgacctggggcgagacgactgtg
ctcgccaccgtcgtctcggccaagtcagccaagcctgggcaggacttcttcccgctcact
gtcaactatcaggagaaggccttcgccgccggccgcattcccggtggatacttcaagcgt
gagggccgtccgtcagagcgcgagacgctggtctcgcgactgatcgaccggccgatccgg
ccgctcttcgttgacggctacaagaacgagacgcaggtcatcctgaccgtgctgtcgcat
gatctcgagaatgatcccgacgtcctcgcgatggtcgccgcctccgccgcgctgacgctc
tcgggcgtgcccttcatgggcccgatcggcggggcgcgggtcggccacatcaacggcgcg
ctgaaggtcaatccgacgatcgaggagatgaagaattcgacgctcgacctcgtcgtcgcc
ggcaccgccgacgcggtgctcatggtcgagtcggaggccaaggagctttccgaggagacg
atgctcgaggcggtgatgaccggccatcgcggcttccaacccgtgatcgacgcgatcatt
cgcctggccgagcgcgccgccaaggagccgcgcgacttctcgccgccggccaaggaggaa
gtcgccgccgccgtcgccaagatcggcgaagcggagcttcgcgaagcctataagattacc
gtcaagcagcagcgctatgcgacggtcgacgccgtcaaggcgaaggtcttcgcggcgctc
gcgccggagggcgccgaggcgaagttctcgaaggagcagatcgacgaggcgttccacgat
ctgcaggctaaggtcgtgcgctggaacattctcgacgacggactgcgcatcgacgggcgc
gacgtgaagaccgtgcggccgatcgtctccgaggtcggcattctgccccgcgcccatggc
tcggctctgttcacgcgcggcgagacgcaagcgctggtcgtcgccacgctcggcacgggc
gaggacgagcagttcgtggactcgctcgagggcacgtacaaggagcgcttcttgctccat
tacaacttcccgccctattcggtcggcgaaacgggccgcatgggctcgcccggacgtcgt
gagattggacacggcaagctcgcctggcgcgcgatccgcccggtgctgccggctccggcg
gagttcccctacacgctgcggctcgtctccgagatcaccgagtcgaacggctcttcgtcc
atggcgacggtctgcggctcttcgctcgcgctcatggacgccggcgtcccgatgaagcgg
ccgacggccggcattgcgatgggactcatcctcgagggcgagcgcttcgccgtgctctcc
gacattctgggcgacgaggatcacctgggcgacatggacttcaaggtcgccggcacgtcg
gaaggcgtgacctctctgcagatggacatcaagatcgccggcatcaccgaggagatcatg
cgggtggcgctggcgcaggcccgcgacggccgcatgcacatcctcggcgagatgtcgaag
gcgctctcgagctcccgcgccgagctcggcgaatttgcgccgcgcatcgagaccctgaag
atcccgacggaaaagatccgcgaggtgatcggcacgggcggcaaggtgatccgcgagatc
gtcgagaagacgggcgccaaggtcaacatcgaggacgacggcacggtgaaggtcgcttcc
tccgactccaattcgatcaaggcggcgatcaattggatcaagtcgatcgcctccgatccg
gaggtcggccagatctacgaaggcacggtggtcaagacggcggagttcggcgccttcgtg
aacttcttcggctcaaaggacggcctcgtccacatctcgcagctcgcggcgacgcgcgtc
gccaagacgaccgacgtcgtcaaggaaggcgacaaggtcaaagtgaagctcttaggcttt
gacgatcgcggcaaggtgcgcctctcaatgcgcgcggtcgatcagacgaccggcgaggac
atcgaggccaaggccgcgaagtccgacggaaccggcgcgcaaccgcaagtttga
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