Methylocystis bryophila: B1812_19845
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Entry
B1812_19845 CDS
T04837
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbry
Methylocystis bryophila
Pathway
mbry03030
DNA replication
mbry03430
Mismatch repair
mbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1812_19845
03430 Mismatch repair
B1812_19845
03440 Homologous recombination
B1812_19845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbry03032
]
B1812_19845
03400 DNA repair and recombination proteins [BR:
mbry03400
]
B1812_19845
Enzymes [BR:
mbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1812_19845
DNA replication proteins [BR:
mbry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1812_19845
DNA repair and recombination proteins [BR:
mbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1812_19845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HROB
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ARN82957
UniProt:
A0A1W6MZD2
LinkDB
All DBs
Position
4181984..4185457
Genome browser
AA seq
1157 aa
AA seq
DB search
MNARVSSDPGFVHLHVHTAFSLREGALGLTRLVELAEKNAQPAIGVADTNNLFAALEFSE
KAAKAGLQSLPGAQIAVAFEAPERGAVRREHAFGNLVLIAKSRAGYLNLMRLCSRAHLEA
SPGEPPALTLADLESDGAEIIALTGGPLGALDPLIAQGRAEAAEARLKALAALFPERLYI
EIQRHGSPAEKAAEAPLLDMAYRHGLPLVATNEPFFATRDDFEAHDALLCIAEGSVASQA
ERRRLTPEHYFKSREEMRALFADLPEALSSSVEIARRCAYRPTTSNPIMPRFMRADPQAG
KDALDAMEAAELRRQAREGLEARLAATGPAGGLTSADYDARLEFELGVIEKMRFPGYFLI
VSDFIKFAKSQGIPVGPGRGSGAGSLVAYALTITDLDPMRFGLFFERFLNPERVSMPDFD
IDFCQTRRGEVIDYVRQRYGADRVAQIITFGSFLARGVLRSVGRVLEMPLGQVDKLAKLV
PQNPAKPVTLKEALASEQKLREAVEEDPRVARLFEIASVLEGLYSNASTHAAGIVIADQP
LDEVTPLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLATATALVRARVPDFDL
GNIPLDDAQTYAMLGRGETVGVFQLESAGMRKALVEMRADRFEDIIALVALYRPGPMANI
PTYCAVKHGEEEPDYLHPKIEPVLKETFGVIIYQEQVMQIAQILSGYSLGEADNLRRAMG
KKIKAEMDKQRDRFVDGAVERGIVKGKAEEIFELLAKFADYGFNKSHAAAYALIAYQTAW
FKAHYATEFLAASMTFDMADTDKLAEFRQEAMRLAIVVEPPSVLRSGADFDVAAGPDGKL
AIRYALSAIKGVGDGQARAIVAARGDAPFASLSDFSRRINPREVNKKVLENLAACGAFDA
LNADRARVFGAVETILASANRHQDDRAQGQNALFGLDAREELPLPKCAPWSAAETLQREF
DAVGFFLSGHPLEAYASVAKRLRLQRWSEFSASVRRGASAGRLAAVVLERAERRTKSGSK
MGVVQLSDESGQYEAILFAEGLAQYRDSLEKGAAVLLTLSAALEGDEVRARIVTVESLSV
AAAKQQKGLRIFLRDAAPLEGIRTRLATKGEGEVTLVVMREAEGEEIEIRLPGGYSASAA
VADALKIIPGVIAVEHV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcgcgtgagctctgatcctggattcgtgcatctccatgtgcacacggccttc
tcgctgcgcgaaggggcgctcggcctgacgcgccttgtcgagcttgccgaaaagaacgcg
cagccggccatcggcgtcgccgacacgaacaatctcttcgccgctctcgaattttccgag
aaggccgcgaaagcggggctccagagccttcccggcgcgcagatcgccgtcgccttcgag
gctccggagcgcggcgccgtcagaagagagcacgccttcggcaatctcgtgctgatcgcc
aaatcacgcgcgggctatctcaatctgatgcggctttgctcgcgcgcgcatctcgaggcc
agccccggcgagccgccggcgctgacgctcgccgatctcgaaagcgatggcgcggagatc
atcgcattgacgggcggacctctgggcgcgctcgatcccctcatcgcgcagggacgcgcc
gaggcggcggaagcgcggctcaaggcgcttgccgcgctttttcccgagcggctctatatc
gagatccagcggcatggatcgccggcggagaaggcggcggaggcgccgctcctcgacatg
gcctacaggcacggccttccgctcgttgcgacgaacgaacccttcttcgcgacgcgcgac
gatttcgaagcccatgacgcgctgctttgcattgcggaagggagcgtcgcgagccaggcc
gagcgccgccgcctgacgccggaacattatttcaaaagccgcgaggaaatgcgcgcgctt
ttcgccgacctgccggaggcgctatcgagcagcgtcgagatcgctcggcgatgcgcctac
cgcccgacgaccagcaacccgatcatgccgcgtttcatgcgcgccgatccgcaagccggc
aaggacgcgcttgatgcaatggaggccgcggaactgcgtcgccaggcgcgcgaaggcctc
gaggcgcgcctcgccgcgacggggccggcgggggggctcacttccgccgactatgacgcg
cggcttgagttcgagctcggcgtcatcgagaagatgcgctttcccggctattttctcatc
gtctcggacttcatcaaattcgcaaagtcgcaagggataccggtggggcccggccgcggc
tccggcgccggctcgctcgtcgcttatgcgctgacgatcaccgatctcgatcccatgcgt
ttcggtctcttcttcgagcgcttcctcaatccggaacgcgtctcgatgccggacttcgac
atcgatttctgccagacgcggcgcggcgaggtcatcgattatgtgcgccagcgctacggc
gccgatcgggtcgcgcagatcatcactttcggatcgttcttggcgcgcggcgtgctgcgt
agcgtcgggcgcgtgctcgaaatgccgcttgggcaggtcgacaagctcgcgaagctcgtc
ccgcaaaatccggccaagcccgtgacgctgaaggaggcgctggcgagcgagcagaagctt
cgcgaagcggtcgaggaagatccgcgggtcgcgcggctcttcgagatcgcaagcgtgctc
gaggggctctattccaacgcctcgacgcatgcggcgggcatcgtcatcgccgatcagccg
ctcgacgaagtgacgccgctttatcgcgacccgaagtccgacatgccggtgacccagttc
aacatgaaatgggtcgagccggcggggcttgtgaagtttgacttcctgggcctgaagacg
ctgaccgtgctcgcgacggcgactgcgctggtgcgcgcccgcgtcccggatttcgacctc
ggcaacatcccgctcgacgacgcgcagacatatgcgatgctcgggcggggcgagaccgtc
ggcgtgttccagctcgaaagcgccggcatgcgcaaggcgctcgtcgagatgcgcgccgac
cgtttcgaggacatcatcgcgctcgtcgcgctctaccgccccggcccgatggcgaatatt
ccgacctattgcgccgtgaagcatggcgaggaagagccggattacctgcaccccaagatc
gagcccgttctcaaggaaaccttcggagtcatcatctaccaagagcaggtgatgcagatc
gcgcagattctgtcgggctactcgctcggcgaggccgacaatctgcgccgcgccatgggc
aagaagatcaaggcggagatggacaagcagcgcgaccgcttcgtcgacggggcggtggag
cgcggcatcgtcaagggcaaagccgaagagatcttcgagctgctcgccaaattcgccgat
tatggcttcaacaagagccatgcggcggcctatgcgctgatcgcctatcagaccgcctgg
ttcaaggcgcattatgcgaccgagttccttgcggcgtcgatgaccttcgacatggccgac
accgacaagctcgctgaatttcggcaggaagccatgcggcttgcaatcgtggtcgagccg
ccttccgttctgcgctccggcgccgatttcgacgtcgcggcggggccggacggcaagctg
gccatccgctatgcgctcagcgcgatcaagggcgtcggcgacggccaggcgcgcgcgatc
gtcgccgcgaggggagacgcgccttttgcgagcctttcggatttctccaggcgcatcaat
ccgcgcgaggtgaacaaaaaagttttggaaaatctcgccgcctgcggcgccttcgacgcg
ctcaatgccgatcgcgcccgcgtcttcggggcggtggaaacgatactcgcttccgcgaac
cgacatcaggacgatcgcgcccagggccagaacgcgctttttggcctggacgcgcgcgag
gagcttccgctgcccaaatgcgcgccctggagcgccgccgaaacgttgcagcgcgagttc
gacgcggtgggctttttcctttccggccatccgctcgaagcctatgcgagcgtggccaaa
cgtctgcgtctgcagcgctggagcgagttctcggcgtcggtgcggcgcggcgcgagcgcg
ggacgtctcgccgccgtcgtgctggagcgcgccgagcggcgcaccaaatcgggctccaag
atgggcgtcgtgcaactctccgacgagagcgggcaatatgaggcgatcctctttgcggag
gggctcgcgcaatatcgcgattctctcgaaaagggcgctgctgtgctgctcacgctctcg
gccgcgctcgaaggcgacgaggtgcgcgcgcgaatcgtgaccgtcgagagcctttcggtc
gcggcggcgaagcagcagaagggcctgcgcatcttcctgcgcgacgccgcgccgctcgaa
gggatcaggactcggctcgcgacgaaaggggagggcgaggtgacgctcgtcgtgatgcgc
gaggcggagggcgaggaaatcgagatccggctgccgggcggctattcggcgagcgccgcg
gtcgccgacgcgctgaaaatcatccccggcgtcatcgccgtggagcatgtgtag
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integrated database retrieval system
