Methylocystis bryophila: B1812_21270
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Entry
B1812_21270 CDS
T04837
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbry
Methylocystis bryophila
Pathway
mbry03410
Base excision repair
mbry03430
Mismatch repair
mbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1812_21270
03430 Mismatch repair
B1812_21270
03440 Homologous recombination
B1812_21270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbry03400
]
B1812_21270
DNA repair and recombination proteins [BR:
mbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B1812_21270
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1812_21270
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1812_21270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF6724
Motif
Other DBs
NCBI-ProteinID:
ARN83188
UniProt:
A0A1W6N029
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All DBs
Position
complement(4470653..4472488)
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AA seq
611 aa
AA seq
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MLRLSDSGAYGVASLKISESFLGVEASVMGRRWSSRLTREGEGLAEALSTAHGYDPLLAR
VLAGRGVSVEAAPGYLAPKLRDLLPEPYSLLDMEAATLRLAEAIQAREQIAIFGDYDVDG
ACSSALLAEFLVAAGAPAPFIHIPDRITEGYGPNVEAIEALAERGATLLVTLDCGTVSFE
PLARARALGLSTLVIDHHQAAEALPDALVVNPNRQDDLSGQGALCAAGLVFLTLVAVSRE
LRKRDHWASREAPDLLEALDLAALATVADVAPLTGLNRALVAGGLGVMRGRRRLGLAALM
DAARMDGRPSAWRLGFVLGPRINAGGRIGDAGLGARLLLERDPAAALAGARELDRLNGER
QALEKATVALAIDAAEEALARSNRISCLVLGAADWHPGVLGLVAAKLKERFKIPSFALNF
KGEIASGSGRGLSGVDLGKAVRGAVQKGLAERGGGHAMAAGVTVARDKLDAFRDFMNETL
ESDVETARQAEGLWLDGAVTARGASLERLRLIEQAGPYGQGNSEPVFALPAHRLAFVAPV
GDSHLRARFTAGDGAGVDAMLFRAADTPLGAALSKGRGGAFHVALRLSVGEWRGTEKVDA
LLVDLAPASSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctgtctgattctggagcatatggcgtggcgtctcttaagatctcggaaagc
tttctcggcgtcgaagcctccgtgatggggcgacgctggtcgtcgcggctcacgcgcgaa
ggcgaggggctcgccgaagcgctcagcacggcccatggctatgacccgctcctcgcccgc
gtgctcgcggggcgcggcgtctccgtggaggcggcgccgggctaccttgcgccgaagctg
cgcgatctgctgcccgagccttacagcttgctcgatatggaggcggcgaccttgcggctc
gcggaggccatccaagcccgcgagcagatcgccattttcggggactacgacgtcgacggc
gcctgctcctcggcgcttctcgccgaatttctggtcgccgccggggcgcccgcccccttc
attcacattcccgatcgcatcaccgagggctacggccccaacgtcgaggcgatcgaggcg
cttgccgaacgcggcgcgacgctgctcgtcaccctggactgcggcacggtgagctttgag
ccgcttgcccgggcgcgggcgctcggcctctcgactctcgtcatcgaccatcatcaggcc
gcggaggcgctcccggatgcgctcgtcgtcaatccgaaccggcaggatgatctctcgggg
cagggggctctctgcgccgcgggcttggtctttctgacgctcgtcgcggtttcgcgcgaa
ttgcgcaagcgcgatcattgggcttcgcgcgaagcgcccgacctgctcgaggctctcgat
ctcgcggcgctggcgaccgtcgcggacgtcgccccgcttacgggactcaatcgagccttg
gtcgccggagggctcggcgtcatgcggggacgccgacgcctaggcctcgcggcgctgatg
gacgccgcccgaatggatgggcgaccgagcgcctggcgcctgggctttgtcttgggtccc
cgaatcaacgccggggggcggatcggcgacgccggactcggggcgaggctgcttttggag
cgcgacccagccgccgccctggctggcgcgcgcgagctcgaccggctgaacggcgagcgt
caggcgctcgaaaaggcgacggtcgcactggcgattgacgccgcggaggaggcgttggcg
cgctccaaccggatctcctgcctcgtccttggcgccgcagattggcacccaggcgtgctc
ggcctcgtcgccgcaaagttaaaggagaggtttaagattccttcatttgcacttaatttt
aaaggagaaatagcttctggttcaggtagaggtttaagtggcgtcgatctgggaaaagca
gtccggggcgctgtccagaaggggctcgccgaaagaggcggcggccatgcgatggcggcc
ggcgtgacggtcgcccgcgacaagctcgacgcctttcgcgactttatgaatgagactctg
gagagcgacgtcgaaaccgcgcggcaagcggaggggctttggctcgacggcgccgtgacc
gcgcgcggcgcttctctcgagcgcctgcggctcattgagcaggccggcccatacgggcag
ggtaacagcgagcccgtcttcgcccttccggcgcatcgcctggccttcgtggccccggtc
ggcgacagccatttgcgcgcgcgcttcaccgctggcgacggggcgggggtcgacgccatg
ctcttccgcgcggccgacacgccgctcggcgccgcgctgagcaagggtcgcggcggcgcc
ttccacgtcgcgctgcgcctgtcagtgggggaatggcgggggacggagaaggtcgacgcg
ctgcttgtcgacctcgcgcccgcatcgagctcgtga
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