Entry |
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Name |
(GenBank) hypothetical protein
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KO |
|
Organism |
mbs Marinobacter sp. BSs20148
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mbs00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MRBBS_0019
09124 Replication and repair
03420 Nucleotide excision repair
MRBBS_0019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mbs03021]
MRBBS_0019
03036 Chromosome and associated proteins [BR:mbs03036]
MRBBS_0019
03400 DNA repair and recombination proteins [BR:mbs03400]
MRBBS_0019
Enzymes [BR:mbs01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MRBBS_0019
Transcription machinery [BR:mbs03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MRBBS_0019
Chromosome and associated proteins [BR:mbs03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MRBBS_0019
DNA repair and recombination proteins [BR:mbs03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MRBBS_0019
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
31665..33929
|
AA seq |
754 aa
MKVAVRTLCEFAARTGDLDFRYTPAPSAEEGIAGHQAIQAKRGYGYKSEYPVSGECLGLA
LSGRADVYNSHSGLLEEIKTHRGDLSRIRGHQRALHRAQLRAYGALLCHQENLKTVKLAL
VYFDIGNNRETSISETACADELWLELEVLCDRYRLWAEREAHHREQRNIRLSGLRFPFAQ
FRPRQRQLAETVYKNTLKGGTLLLEAPTGLGKTLGTLFPALMAMPAANQDVLCYLTCRNT
ARQLAIDAVDRLRAAQEAPQIWPLRTLELVSKADACEHPDKACHGDACPLAKGFFDRLPD
ARAEAAQTNSTLTQEALAKIAAGHNICPYFLAQEMARWCDLVIGDVNRMFDQSALLHGLT
RQNQWKTAVLLDEAHNLVDRGRGMYSVQLDQQRLLKLRKTAPNVLKSHLDRTARAWQGVI
RDQAEAGTAPVFLNALPVSLTGSLQGLVSGLTDYLADNPPDLALQEVLFESVAFMKLADS
FADHSLCEFRREGRGRASLTIQNLVPADFLRDRFQAAASVLLFSATLSPGVYYRDLLGLP
ENSCFTSLRSPFGADQLQLNFTPKISTRHAHRETSVMPIAELIAQQYRQRPGHYLAFFSS
FKYLNEVNVALSRSAADVPQRSQQPGMSPQQRKAFLAGFREESGSVAFAVLGGVFSEGID
LPGDQLIGAFVATLGLPPFDAWHEILKQRLQQRFGAGYEYTYLIPGLQKVAQAAGRVIRT
PEDEGVIWLIDDRFLQPQIQKLLPRWWFGTETAD |
NT seq |
2265 nt +upstreamnt +downstreamnt
atgaaggtagcggtgcgcacactctgcgagtttgctgcccgtacaggtgatctggatttt
cgttacaccccggcgcccagcgccgaggagggcattgccggccaccaggcgattcaggcc
aagcgcggatacggctacaaaagcgagtacccggtcagcggcgaatgcctgggcttggcg
ctgtctggccgcgccgatgtgtataactcgcattccggactgctggaagaaatcaaaacc
caccgtggcgatctgtcgcgcatccgcggccatcagcgcgcgctgcaccgggctcagctg
cgagcctatggtgctctgctttgccatcaggaaaatctcaaaacagtaaagctggcactg
gtgtacttcgacatcggtaacaaccgtgaaacgtcgatcagcgaaaccgcgtgcgccgat
gagctttggctcgagctggaagtgctgtgtgaccgctaccggctgtgggcagaacgcgaa
gcccatcaccgggagcagaggaatattcgcctgtctggactgcgtttcccgtttgcacag
tttcgcccacgccagcgtcagcttgcagaaaccgtttacaaaaacactttaaaaggcggc
accctgctattggaagcgcctactggcctgggcaaaacactgggcactttgttccccgca
ctcatggctatgccggcggcgaatcaggacgtgctgtgttatctcacctgccgcaacacc
gcccgtcagctggcaatagatgcggtagaccgtctaagagctgcgcaggaagcaccgcaa
atctggcctttaagaacgttggaactggtgtctaaagccgatgcttgcgagcacccggac
aaagcttgccacggcgatgcttgcccgctggccaaaggtttttttgaccgcctgccagac
gcccgcgctgaagccgcccaaaccaattccacattgacccaggaggcgctggcaaaaatc
gccgctggtcataatatttgtccctactttctggcccaggaaatggcgcgctggtgtgac
ctggtgattggtgacgtaaaccggatgtttgatcagtctgccctgctccacggcttgacc
cggcagaatcagtggaaaacggccgtgctgctggatgaagcccacaacctggtggatcgg
ggccgcggtatgtattcggtgcagctggatcaacagcggcttttgaagctgcgtaaaacc
gcgcccaacgtcttgaaatcccacttggaccgcaccgcccgggcgtggcaaggagtgatt
cgtgatcaagccgaagcgggcacagccccggtgtttctaaatgctttgcctgtgtcgctg
actggcagcctgcagggcttggtgtctgggcttacggattatctggcggataacccgccg
gacctggcattgcaggaagtactgttcgagtccgtggctttcatgaagctggcggattcg
ttcgccgatcattccctgtgtgaatttcgccgcgaaggtcgcggtcgcgccagcctgact
attcagaatctggtgccggcggattttctgcgcgaccggtttcaggccgcagcctcggtg
ttgctgttttccgcgacgttaagccccggcgtgtattaccgagatttgctggggttgccg
gaaaacagttgttttacctccctgcgcagcccgttcggcgctgaccagctacagctgaat
ttcacgcccaagatcagcacccgccatgctcaccgtgaaacgtcggtaatgcctattgcc
gagctgatcgcgcagcaatatcgccagcggccgggtcattatctggcgtttttcagcagt
tttaaatatctgaatgaggtcaatgtggcgttgagccgcagcgccgcagatgtgccccaa
cgttcacagcagccaggcatgagtccacagcagcgcaaagcttttctggcagggttccgc
gaagaatccggcagtgtggcctttgcggttctggggggcgtgttcagtgaaggtattgat
ttaccgggggaccagttgattggcgcgtttgtggccaccttgggcctgccgccctttgat
gcctggcacgaaattttgaaacagcgcctgcaacagcgttttggcgcaggttacgaatac
acctacctgattcctggcctgcagaaagtggcccaagccgctggtcgggtgattcgaacg
ccagaagacgaaggggtgatatggctgattgacgaccgatttttacagccgcaaattcag
aagttgttgccgcgatggtggtttggaaccgagaccgccgattaa |