KEGG   Marinobacter sp. BSs20148: MRBBS_0019
Entry
MRBBS_0019        CDS       T02323                                 
Name
(GenBank) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
mbs  Marinobacter sp. BSs20148
Pathway
mbs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MRBBS_0019
  09124 Replication and repair
   03420 Nucleotide excision repair
    MRBBS_0019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbs03021]
    MRBBS_0019
   03036 Chromosome and associated proteins [BR:mbs03036]
    MRBBS_0019
   03400 DNA repair and recombination proteins [BR:mbs03400]
    MRBBS_0019
Enzymes [BR:mbs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     MRBBS_0019
Transcription machinery [BR:mbs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MRBBS_0019
Chromosome and associated proteins [BR:mbs03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    MRBBS_0019
DNA repair and recombination proteins [BR:mbs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MRBBS_0019
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD HBB
Other DBs
NCBI-ProteinID: AFP28957
UniProt: M1FAU8
LinkDB
Position
31665..33929
AA seq 754 aa
MKVAVRTLCEFAARTGDLDFRYTPAPSAEEGIAGHQAIQAKRGYGYKSEYPVSGECLGLA
LSGRADVYNSHSGLLEEIKTHRGDLSRIRGHQRALHRAQLRAYGALLCHQENLKTVKLAL
VYFDIGNNRETSISETACADELWLELEVLCDRYRLWAEREAHHREQRNIRLSGLRFPFAQ
FRPRQRQLAETVYKNTLKGGTLLLEAPTGLGKTLGTLFPALMAMPAANQDVLCYLTCRNT
ARQLAIDAVDRLRAAQEAPQIWPLRTLELVSKADACEHPDKACHGDACPLAKGFFDRLPD
ARAEAAQTNSTLTQEALAKIAAGHNICPYFLAQEMARWCDLVIGDVNRMFDQSALLHGLT
RQNQWKTAVLLDEAHNLVDRGRGMYSVQLDQQRLLKLRKTAPNVLKSHLDRTARAWQGVI
RDQAEAGTAPVFLNALPVSLTGSLQGLVSGLTDYLADNPPDLALQEVLFESVAFMKLADS
FADHSLCEFRREGRGRASLTIQNLVPADFLRDRFQAAASVLLFSATLSPGVYYRDLLGLP
ENSCFTSLRSPFGADQLQLNFTPKISTRHAHRETSVMPIAELIAQQYRQRPGHYLAFFSS
FKYLNEVNVALSRSAADVPQRSQQPGMSPQQRKAFLAGFREESGSVAFAVLGGVFSEGID
LPGDQLIGAFVATLGLPPFDAWHEILKQRLQQRFGAGYEYTYLIPGLQKVAQAAGRVIRT
PEDEGVIWLIDDRFLQPQIQKLLPRWWFGTETAD
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgaaggtagcggtgcgcacactctgcgagtttgctgcccgtacaggtgatctggatttt
cgttacaccccggcgcccagcgccgaggagggcattgccggccaccaggcgattcaggcc
aagcgcggatacggctacaaaagcgagtacccggtcagcggcgaatgcctgggcttggcg
ctgtctggccgcgccgatgtgtataactcgcattccggactgctggaagaaatcaaaacc
caccgtggcgatctgtcgcgcatccgcggccatcagcgcgcgctgcaccgggctcagctg
cgagcctatggtgctctgctttgccatcaggaaaatctcaaaacagtaaagctggcactg
gtgtacttcgacatcggtaacaaccgtgaaacgtcgatcagcgaaaccgcgtgcgccgat
gagctttggctcgagctggaagtgctgtgtgaccgctaccggctgtgggcagaacgcgaa
gcccatcaccgggagcagaggaatattcgcctgtctggactgcgtttcccgtttgcacag
tttcgcccacgccagcgtcagcttgcagaaaccgtttacaaaaacactttaaaaggcggc
accctgctattggaagcgcctactggcctgggcaaaacactgggcactttgttccccgca
ctcatggctatgccggcggcgaatcaggacgtgctgtgttatctcacctgccgcaacacc
gcccgtcagctggcaatagatgcggtagaccgtctaagagctgcgcaggaagcaccgcaa
atctggcctttaagaacgttggaactggtgtctaaagccgatgcttgcgagcacccggac
aaagcttgccacggcgatgcttgcccgctggccaaaggtttttttgaccgcctgccagac
gcccgcgctgaagccgcccaaaccaattccacattgacccaggaggcgctggcaaaaatc
gccgctggtcataatatttgtccctactttctggcccaggaaatggcgcgctggtgtgac
ctggtgattggtgacgtaaaccggatgtttgatcagtctgccctgctccacggcttgacc
cggcagaatcagtggaaaacggccgtgctgctggatgaagcccacaacctggtggatcgg
ggccgcggtatgtattcggtgcagctggatcaacagcggcttttgaagctgcgtaaaacc
gcgcccaacgtcttgaaatcccacttggaccgcaccgcccgggcgtggcaaggagtgatt
cgtgatcaagccgaagcgggcacagccccggtgtttctaaatgctttgcctgtgtcgctg
actggcagcctgcagggcttggtgtctgggcttacggattatctggcggataacccgccg
gacctggcattgcaggaagtactgttcgagtccgtggctttcatgaagctggcggattcg
ttcgccgatcattccctgtgtgaatttcgccgcgaaggtcgcggtcgcgccagcctgact
attcagaatctggtgccggcggattttctgcgcgaccggtttcaggccgcagcctcggtg
ttgctgttttccgcgacgttaagccccggcgtgtattaccgagatttgctggggttgccg
gaaaacagttgttttacctccctgcgcagcccgttcggcgctgaccagctacagctgaat
ttcacgcccaagatcagcacccgccatgctcaccgtgaaacgtcggtaatgcctattgcc
gagctgatcgcgcagcaatatcgccagcggccgggtcattatctggcgtttttcagcagt
tttaaatatctgaatgaggtcaatgtggcgttgagccgcagcgccgcagatgtgccccaa
cgttcacagcagccaggcatgagtccacagcagcgcaaagcttttctggcagggttccgc
gaagaatccggcagtgtggcctttgcggttctggggggcgtgttcagtgaaggtattgat
ttaccgggggaccagttgattggcgcgtttgtggccaccttgggcctgccgccctttgat
gcctggcacgaaattttgaaacagcgcctgcaacagcgttttggcgcaggttacgaatac
acctacctgattcctggcctgcagaaagtggcccaagccgctggtcgggtgattcgaacg
ccagaagacgaaggggtgatatggctgattgacgaccgatttttacagccgcaaattcag
aagttgttgccgcgatggtggtttggaaccgagaccgccgattaa

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