Marinobacter sp. BSs20148: MRBBS_0124
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Entry
MRBBS_0124 CDS
T02323
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
mbs
Marinobacter sp. BSs20148
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mbs01002
]
MRBBS_0124 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbs01011
]
MRBBS_0124 (ycfS)
Peptidases and inhibitors [BR:
mbs01002
]
Cysteine peptidases
Family C82
MRBBS_0124 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
mbs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MRBBS_0124 (ycfS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
SH3_3
Motif
Other DBs
NCBI-ProteinID:
AFP29062
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All DBs
Position
129702..130712
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AA seq
336 aa
AA seq
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MGVKMRLLTLLLSAAFAPLLLAQGAANPVPADKAARVATYSIQGDMAGQLSVFKTRYEDT
FADIGIAEALGYLELVKANPGVDPWLPGEGTSITLPRHYVMPDAKREGIVINLAEYRLYY
FTDSGVQVYPVGVGTEENPSPLTNAQVTMALTSPAWYPPESIRAEHAAVGDFLPRMIPPG
PDNPLGSHALILSEKGYLIHGTNKKFGVGMAVSHGCFRMYNEDISRFAYQIAKGTPVQIV
RQSVKVGVANGQVWLEVHRPEEDYSAADRNKLWLATVEQLERLAIAHPEVEVRRRAIEIA
VDQASGVPTVIGEKITSVAKGEPVKVIENAGQQLYF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaaaatgcgtttattgacactgttgctgagtgcagcctttgcgcctttgctg
ctggctcagggcgcagcgaatcctgttccggctgataaggcagcaagagtggctacctac
agtattcagggcgatatggccgggcagttgagtgtgtttaaaacccgctacgaagacacc
tttgccgatataggtatcgctgaggctctgggttatctggaattggtgaaagccaaccct
ggagtagacccgtggctgcctggcgaaggcaccagtattactttgccccggcactatgtt
atgccggatgcgaagcgcgaagggattgtgatcaacctggcggaatatcgcctttattac
tttaccgacagcggcgttcaggtttacccggtgggcgttggtaccgaagaaaacccatca
ccgttaacgaacgctcaggtgaccatggctttgacgtcgccagcttggtacccgcctgag
agtattcgcgccgagcacgccgctgttggcgatttcctgccgcggatgattccgccgggg
ccagataacccgttgggtagccatgcgcttattttgagtgaaaaaggctatttaattcat
ggcaccaataaaaaatttggtgtcggtatggcggtaagccatggttgtttccgcatgtat
aacgaagacatttcgcgttttgcttatcagattgcaaagggcacaccggtgcagatagtc
cgtcaatcagtgaaagtgggtgttgccaatggtcaggtgtggctggaagtacatcggccc
gaggaagattattctgcagcggatcgcaacaagctttggctggctacagtggaacagttg
gaacgtctggctattgctcacccagaagtggaagtacggcgtagggcgattgaaattgca
gttgatcaagcgagcggcgtgcctacggtgattggtgagaaaattacatcggtggcgaaa
ggtgagcctgtaaaggtcatagaaaatgctgggcaacagctgtatttttaa
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