Marinobacter sp. BSs20148: MRBBS_0540
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Entry
MRBBS_0540 CDS
T02323
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03030
DNA replication
mbs03410
Base excision repair
mbs03420
Nucleotide excision repair
mbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRBBS_0540 (polA)
03410 Base excision repair
MRBBS_0540 (polA)
03420 Nucleotide excision repair
MRBBS_0540 (polA)
03440 Homologous recombination
MRBBS_0540 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_0540 (polA)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_0540 (polA)
Enzymes [BR:
mbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRBBS_0540 (polA)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MRBBS_0540 (polA)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MRBBS_0540 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MRBBS_0540 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AFP29478
UniProt:
M1FGF1
LinkDB
All DBs
Position
complement(558082..560892)
Genome browser
AA seq
936 aa
AA seq
DB search
MTEQHTPPVVLVDGSSYLFRAYHALPPLMTSKNHPTGAIKGVIAMIRRIDLDFPGSKIVV
VFDAKGKTFRNDLYADYKANRPPMPEDLALQIEPIHQIVRHMGLPLLIVDGVEADDVIGT
LAHEATSKGIDVVVSTGDKDMAQLVSPHVTLINTMTNTHMDAAGVEEKFGVTPAQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQEYHDIDNLMANADKVKGKVGEYLRDARETLPLSR
TLATIKLDVELAFGLEDLQEREQNNSALLELFHEYELRSWINELESLGAQTKGPAAAQSG
ADPVTSDQSESDQSASNQSAAHQSSPPEPAQSRDKHYSIITDQAELDKWVARLNAAELFA
FDTETTSLKYMAAEVVGVSFAVQPFEAAYVPFCHDYMGAPEQLDRDTVLAQLKPLLESPD
HKKVGQNLKYDKNVLANHDICLEGIAEDTMVQSYVLNSVSSRHNMDALALHYLGEETTTF
ESLAGKGAKQLTFNQLELDKAGPYAAEDADITLRLHQALRPQLAATGKLQSVYEDIDLPL
VPVLSRMEQRGTLISASTLRQHSQELAERMAELETAAYEAAGETFNLGSPKQLQVIFYEK
LGLPVLKKTPKGAPSTAEPVLQELAHRHELPRLLLEHRSLSKLKSTYTDTLPELIHHRTG
RVHTSYHQAVTATGRLSSSEPNLQNIPIRSEQGRRIRQAFVAEKGYKLLAADYSQIELRI
MAHLSEDKGLLTAFAKGEDIHKATAAEVFGVTLEEVNSDQRRSAKAINFGLIYGMSAFGL
ARQLDVERKVAQQYIDRYFERYPGVLTYMDKIRKQAHEDGYVETLFGRRLYLPEINTRNK
QLQQAAERTAINAPMQGTAADIIKLAMIEVERWLLAEYPDSARMTMQVHDELIIEVKEEA
VEAVREGLIKRMSGAAELAVPLLVEAGVGDNWDQAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaacacactccacccgtggttcttgtagacggttcctcttatcttttccgc
gcttaccacgcacttcctccactcatgaccagcaaaaaccacccaaccggggccatcaag
ggcgttattgccatgatacgccggatagatctggatttccccggctccaaaattgtggtg
gtgttcgatgccaagggcaaaaccttccgcaacgacctttacgcagattacaaagcaaac
cgcccgccgatgcctgaagacctggctttgcaaattgagcccattcaccagattgtcaga
cacatgggcctgccactgctgattgtggatggcgtggaagccgatgacgtgattggcacc
ctggcccacgaggccaccagcaaaggcatagatgtcgtggtgtccacgggagataaagac
atggcgcagctggtaagcccacacgtgaccctgatcaataccatgaccaacacccacatg
gacgccgccggcgttgaagaaaagttcggcgtaacaccggcacagatcatcgattacctc
gccttggtgggcgacaaagtcgataacatacccggcgtaaacaagtgcggcccgaaaacc
gcggtaaagtggctgcaggaataccacgacattgacaatctgatggccaacgccgataag
gtcaaaggcaaggttggggaataccttcgggatgccagggaaaccctacccctgagccgg
acactggccaccatcaaactggacgtagaactggcgttcgggctggaagatcttcaggaa
cgggagcagaacaacagcgccctgcttgagctgttccacgaatacgaattgcgcagctgg
ataaacgagcttgaaagcctaggtgcccaaaccaaaggccctgccgctgcgcaatccggt
gctgacccagttacatctgatcaaagcgagtcagatcaaagcgcgtctaatcagagcgcc
gcacatcaaagcagcccgcctgaacccgctcagtcccgcgacaagcactacagcattatt
accgaccaggcagaactggataaatgggtagcgcgcctgaacgccgcagagctgtttgcc
tttgacaccgaaaccaccagcctgaaatatatggctgcagaggttgttggcgtgtcgttt
gcggtgcaaccgtttgaagcggcctatgtgcccttttgccacgactacatgggcgcgccc
gaacagctggaccgcgacacggtactggcccagctgaaaccgctactggagagccccgat
cataaaaaagtggggcaaaatctgaagtacgacaaaaacgtgctggccaaccacgacatc
tgtctggaaggcattgccgaagacacaatggtgcaatcctacgtgctgaactcggtgtcc
tcacgccacaatatggacgccctggctctgcattatctgggagaggaaaccacaactttt
gaatccctggcaggtaaaggtgccaaacagctgacgttcaaccagctggagcttgataaa
gccggcccttacgccgccgaagacgccgacattacccttcgattgcatcaggcactacgc
ccacaactagccgccaccggtaagctgcagtcggtgtatgaagacattgatttgcccttg
gtacccgtgctgtcgcgcatggagcaaaggggcacgctgatcagtgccagcaccctacgc
cagcacagccaggaactggctgaacgcatggccgaactggaaacagccgcgtatgaagct
gccggggagaccttcaaccttggctcgccaaaacagctgcaggttattttttatgaaaag
ttgggtttgccagttctcaaaaaaacgcccaaaggtgcgccctcaacggccgaaccggtg
ctgcaggaactggcccaccgccacgaactgccaaggcttttgctggaacaccgcagcctg
agcaagctcaaatccacctacacagacaccctgccagagctgatccaccaccgcaccgga
cgcgtgcacacgtcttaccatcaagcagtcacggccaccgggcgcctgtcatcgtcagag
cccaatctgcagaacatacccattcgcagcgagcaaggccgacgcattcgccaggcgttt
gtcgccgagaaaggctacaagctgctggcagcagactactcccagattgaactgcgcatt
atggcgcacctgtcggaagacaaaggcctgctaaccgcgtttgccaagggcgaagacatt
cacaaagccaccgcagcggaagtgttcggggtaacactggaagaagtgaacagcgaccag
cggcgtagcgctaaagccatcaacttcggactgatttacggcatgtcggcgtttggcctg
gcgcggcaactggatgtcgagcgtaaagtagcccagcaatacatcgaccgctactttgag
cgttaccccggcgtattgacatacatggacaagattcgcaaacaggcccatgaagacggc
tacgtggaaactctgtttggccggcgcttgtacctgcccgagatcaacacccgcaacaag
caactgcagcaagcagccgagcgcaccgcgattaacgcgcccatgcaaggtaccgctgcc
gacattatcaagctcgcgatgattgaagtggagcgctggctgctggccgaatacccggac
agcgcccgcatgaccatgcaggtgcacgacgaactgatcattgaagtaaaagaagaggcg
gtagaagcggtgcgcgaaggactgatcaagcgcatgtcgggcgctgcggaactcgctgtg
cccttgctggtagaggctggcgtgggtgataactgggaccaggcacactag
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