KEGG   Marinobacter sp. BSs20148: MRBBS_0540
Entry
MRBBS_0540        CDS       T02323                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mbs  Marinobacter sp. BSs20148
Pathway
mbs03030  DNA replication
mbs03410  Base excision repair
mbs03420  Nucleotide excision repair
mbs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mbs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MRBBS_0540 (polA)
   03410 Base excision repair
    MRBBS_0540 (polA)
   03420 Nucleotide excision repair
    MRBBS_0540 (polA)
   03440 Homologous recombination
    MRBBS_0540 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbs03032]
    MRBBS_0540 (polA)
   03400 DNA repair and recombination proteins [BR:mbs03400]
    MRBBS_0540 (polA)
Enzymes [BR:mbs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MRBBS_0540 (polA)
DNA replication proteins [BR:mbs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MRBBS_0540 (polA)
DNA repair and recombination proteins [BR:mbs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MRBBS_0540 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MRBBS_0540 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AFP29478
UniProt: M1FGF1
LinkDB
Position
complement(558082..560892)
AA seq 936 aa
MTEQHTPPVVLVDGSSYLFRAYHALPPLMTSKNHPTGAIKGVIAMIRRIDLDFPGSKIVV
VFDAKGKTFRNDLYADYKANRPPMPEDLALQIEPIHQIVRHMGLPLLIVDGVEADDVIGT
LAHEATSKGIDVVVSTGDKDMAQLVSPHVTLINTMTNTHMDAAGVEEKFGVTPAQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQEYHDIDNLMANADKVKGKVGEYLRDARETLPLSR
TLATIKLDVELAFGLEDLQEREQNNSALLELFHEYELRSWINELESLGAQTKGPAAAQSG
ADPVTSDQSESDQSASNQSAAHQSSPPEPAQSRDKHYSIITDQAELDKWVARLNAAELFA
FDTETTSLKYMAAEVVGVSFAVQPFEAAYVPFCHDYMGAPEQLDRDTVLAQLKPLLESPD
HKKVGQNLKYDKNVLANHDICLEGIAEDTMVQSYVLNSVSSRHNMDALALHYLGEETTTF
ESLAGKGAKQLTFNQLELDKAGPYAAEDADITLRLHQALRPQLAATGKLQSVYEDIDLPL
VPVLSRMEQRGTLISASTLRQHSQELAERMAELETAAYEAAGETFNLGSPKQLQVIFYEK
LGLPVLKKTPKGAPSTAEPVLQELAHRHELPRLLLEHRSLSKLKSTYTDTLPELIHHRTG
RVHTSYHQAVTATGRLSSSEPNLQNIPIRSEQGRRIRQAFVAEKGYKLLAADYSQIELRI
MAHLSEDKGLLTAFAKGEDIHKATAAEVFGVTLEEVNSDQRRSAKAINFGLIYGMSAFGL
ARQLDVERKVAQQYIDRYFERYPGVLTYMDKIRKQAHEDGYVETLFGRRLYLPEINTRNK
QLQQAAERTAINAPMQGTAADIIKLAMIEVERWLLAEYPDSARMTMQVHDELIIEVKEEA
VEAVREGLIKRMSGAAELAVPLLVEAGVGDNWDQAH
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgactgaacaacacactccacccgtggttcttgtagacggttcctcttatcttttccgc
gcttaccacgcacttcctccactcatgaccagcaaaaaccacccaaccggggccatcaag
ggcgttattgccatgatacgccggatagatctggatttccccggctccaaaattgtggtg
gtgttcgatgccaagggcaaaaccttccgcaacgacctttacgcagattacaaagcaaac
cgcccgccgatgcctgaagacctggctttgcaaattgagcccattcaccagattgtcaga
cacatgggcctgccactgctgattgtggatggcgtggaagccgatgacgtgattggcacc
ctggcccacgaggccaccagcaaaggcatagatgtcgtggtgtccacgggagataaagac
atggcgcagctggtaagcccacacgtgaccctgatcaataccatgaccaacacccacatg
gacgccgccggcgttgaagaaaagttcggcgtaacaccggcacagatcatcgattacctc
gccttggtgggcgacaaagtcgataacatacccggcgtaaacaagtgcggcccgaaaacc
gcggtaaagtggctgcaggaataccacgacattgacaatctgatggccaacgccgataag
gtcaaaggcaaggttggggaataccttcgggatgccagggaaaccctacccctgagccgg
acactggccaccatcaaactggacgtagaactggcgttcgggctggaagatcttcaggaa
cgggagcagaacaacagcgccctgcttgagctgttccacgaatacgaattgcgcagctgg
ataaacgagcttgaaagcctaggtgcccaaaccaaaggccctgccgctgcgcaatccggt
gctgacccagttacatctgatcaaagcgagtcagatcaaagcgcgtctaatcagagcgcc
gcacatcaaagcagcccgcctgaacccgctcagtcccgcgacaagcactacagcattatt
accgaccaggcagaactggataaatgggtagcgcgcctgaacgccgcagagctgtttgcc
tttgacaccgaaaccaccagcctgaaatatatggctgcagaggttgttggcgtgtcgttt
gcggtgcaaccgtttgaagcggcctatgtgcccttttgccacgactacatgggcgcgccc
gaacagctggaccgcgacacggtactggcccagctgaaaccgctactggagagccccgat
cataaaaaagtggggcaaaatctgaagtacgacaaaaacgtgctggccaaccacgacatc
tgtctggaaggcattgccgaagacacaatggtgcaatcctacgtgctgaactcggtgtcc
tcacgccacaatatggacgccctggctctgcattatctgggagaggaaaccacaactttt
gaatccctggcaggtaaaggtgccaaacagctgacgttcaaccagctggagcttgataaa
gccggcccttacgccgccgaagacgccgacattacccttcgattgcatcaggcactacgc
ccacaactagccgccaccggtaagctgcagtcggtgtatgaagacattgatttgcccttg
gtacccgtgctgtcgcgcatggagcaaaggggcacgctgatcagtgccagcaccctacgc
cagcacagccaggaactggctgaacgcatggccgaactggaaacagccgcgtatgaagct
gccggggagaccttcaaccttggctcgccaaaacagctgcaggttattttttatgaaaag
ttgggtttgccagttctcaaaaaaacgcccaaaggtgcgccctcaacggccgaaccggtg
ctgcaggaactggcccaccgccacgaactgccaaggcttttgctggaacaccgcagcctg
agcaagctcaaatccacctacacagacaccctgccagagctgatccaccaccgcaccgga
cgcgtgcacacgtcttaccatcaagcagtcacggccaccgggcgcctgtcatcgtcagag
cccaatctgcagaacatacccattcgcagcgagcaaggccgacgcattcgccaggcgttt
gtcgccgagaaaggctacaagctgctggcagcagactactcccagattgaactgcgcatt
atggcgcacctgtcggaagacaaaggcctgctaaccgcgtttgccaagggcgaagacatt
cacaaagccaccgcagcggaagtgttcggggtaacactggaagaagtgaacagcgaccag
cggcgtagcgctaaagccatcaacttcggactgatttacggcatgtcggcgtttggcctg
gcgcggcaactggatgtcgagcgtaaagtagcccagcaatacatcgaccgctactttgag
cgttaccccggcgtattgacatacatggacaagattcgcaaacaggcccatgaagacggc
tacgtggaaactctgtttggccggcgcttgtacctgcccgagatcaacacccgcaacaag
caactgcagcaagcagccgagcgcaccgcgattaacgcgcccatgcaaggtaccgctgcc
gacattatcaagctcgcgatgattgaagtggagcgctggctgctggccgaatacccggac
agcgcccgcatgaccatgcaggtgcacgacgaactgatcattgaagtaaaagaagaggcg
gtagaagcggtgcgcgaaggactgatcaagcgcatgtcgggcgctgcggaactcgctgtg
cccttgctggtagaggctggcgtgggtgataactgggaccaggcacactag

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