Marinobacter sp. BSs20148: MRBBS_0635
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Entry
MRBBS_0635 CDS
T02323
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRBBS_0635 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbs03021
]
MRBBS_0635 (rpoA)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_0635 (rpoA)
Enzymes [BR:
mbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRBBS_0635 (rpoA)
Transcription machinery [BR:
mbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MRBBS_0635 (rpoA)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MRBBS_0635 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-ProteinID:
AFP29573
UniProt:
M1FGN7
LinkDB
All DBs
Position
655251..656105
Genome browser
AA seq
284 aa
AA seq
DB search
MPGCAVTEAQIDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMHGRDDAELMLSKKGPGVV
TAGDIKLDHDVEIANPEHIICHLSENGEVNMRLSIARGRGYEPADQRGLDEDETRAIGRL
QLDATFSPVRRVAYSVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVF
VDFDHEKEPERVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLK
TPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctgcgctgttactgaagcgcagattgacggtgtgttgcacgagtacagcgcc
attgaaggtgtccaggaagacgtcatagagattcttttgaatcttaagggcgtcgctgta
aaaatgcacggccgtgacgatgccgagcttatgctcagcaagaagggtccgggtgttgtt
acagccggagatataaagttggatcatgatgtcgagatcgccaatccagaacacattatc
tgtcacctgagcgaaaatggtgaagttaacatgcgtctgagcattgcccgcggtcgtggc
tatgagcctgctgatcagcgcggtctggatgaggacgaaactcgtgccatcggacgtctg
cagctggatgctacgttcagcccggttcgacgcgttgcttattctgtggaaagtgcacgg
gtagagcagcgtaccgacctcgacaagctggttattgatctggagactaatggtactatc
gatccggaagaagcaattcgccgggccgccactattctccagcagcaattggccgtgttt
gttgattttgatcatgaaaaagagccagagcgcgtggaggaagaggaagaaattgatccg
attctgctgcgcccggttgatgatctagagctgacagtacgttccgccaactgcttgaag
gctgagaacatctactacatcggcgatttgattcagcgcacagaagttgagctgttgaag
acgcctaacctgggtaaaaagtcgctgacagagatcaaggacgtactagcgtcccgtggt
ttgtctctgggaatgcgtcttgataactggccgccggcaagccttcgtggtgatgaccgg
gttctgggcggttaa
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