Marinobacter sp. BSs20148: MRBBS_0706
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Entry
MRBBS_0706 CDS
T02323
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs00260
Glycine, serine and threonine metabolism
mbs00460
Cyanoamino acid metabolism
mbs00630
Glyoxylate and dicarboxylate metabolism
mbs00670
One carbon pool by folate
mbs00680
Methane metabolism
mbs01100
Metabolic pathways
mbs01110
Biosynthesis of secondary metabolites
mbs01120
Microbial metabolism in diverse environments
mbs01200
Carbon metabolism
mbs01230
Biosynthesis of amino acids
mbs01240
Biosynthesis of cofactors
mbs04981
Folate transport and metabolism
Module
mbs_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MRBBS_0706 (glyA)
09102 Energy metabolism
00680 Methane metabolism
MRBBS_0706 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MRBBS_0706 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MRBBS_0706 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MRBBS_0706 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MRBBS_0706 (glyA)
Enzymes [BR:
mbs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MRBBS_0706 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AFP29644
UniProt:
M1FCC7
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All DBs
Position
743037..744290
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AA seq
417 aa
AA seq
DB search
MFNRDMKIAGFDDELWNAMQAESHRQEAHIELIASENYTSPRVMEAQGSDLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRAKELFGAAYANVQPHSGSQANSAVFLALLNAGDTVLGMS
LAHGGHLTHGASVNFSGKIYNAVQYGIDTDTGLINYDDVEALAVEHKPKMIIAGFSAYSQ
YLDFARFREIADKVGAYLFVDMAHVAGLVAAGVYPDPVPHAHVLTTTTHKTLRGPRGGLI
LACDDESLHKKLNSAVFPGGQGGPLMHVIAAKAICFKEAMSPEFKTYQQQVVKNAAAMAE
VFVDRGFDVVSGGTKNHLFLLSLIKQDITGKDADAALGRAHITVNKNAVPNDPRSPFVTS
GLRIGTPAVTTRGFAEAECRELSGWICDILADLNDEAVIDRVRGQVEALCARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgtgatatgaaaatcgccggttttgacgacgagctctggaacgccatgcag
gcggagagccatcgccaggaagctcatatcgagctgattgcgtcggaaaactacaccagc
ccgcgggtgatggaagcgcagggcagtgatttgaccaacaagtacgcggaaggttatccc
ggcaagcgttactacggtggttgtgagtttgtagacattgccgagcagctggctattgac
cgtgccaaagaattgttcggagcggcctacgccaacgtgcagccgcactctggttcacag
gccaactcagcggtgtttctagctctgctgaatgcgggcgatacggtattgggcatgagc
ctggcccacggtggccacctgacccacggcgccagcgtgaatttttccggaaaaatttac
aacgctgttcaatatggtatcgacaccgatacaggtctgatcaattacgacgacgtggag
gcgttggcggtggagcacaagccgaagatgatcattgccggcttctccgcttattcgcag
tatcttgatttcgcccgtttccgcgagattgccgataaagtgggtgcctacctgttcgtc
gacatggcacacgtcgctggtttggtggcagcgggtgtttaccctgacccagtcccccac
gctcacgtgctgaccaccactactcacaaaaccctgcgcggtccccgcggcgggctgatt
ctggcctgtgacgacgaatcgctgcacaagaagctgaactccgcggtattccccggtggc
caaggtggcccgttgatgcacgtgattgcggccaaggcgatctgcttcaaagaggctatg
agccccgaattcaagacttatcagcagcaagtggtcaaaaacgctgcggccatggccgaa
gtgttcgttgatcgcggttttgacgtggtgtctggcggtaccaaaaaccacctgttcctg
ttaagcctgatcaaacaggacatcaccggtaaagacgccgatgcagcactgggccgggct
catattaccgtgaacaaaaacgcggtaccgaacgacccacgctcgcctttcgttacgtcg
ggtctgcgcattggtacgccggctgttaccactcgtggttttgccgaagcagaatgtcgc
gaactttccggctggatttgtgacattcttgccgacctgaacgacgaagccgtgattgac
cgtgtgcgcgggcaggttgaagccctgtgcgcccgctttccggtatacgcgtaa
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