Marinobacter sp. BSs20148: MRBBS_0949
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Entry
MRBBS_0949 CDS
T02323
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03410
Base excision repair
mbs03430
Mismatch repair
mbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MRBBS_0949 (recJ)
03430 Mismatch repair
MRBBS_0949 (recJ)
03440 Homologous recombination
MRBBS_0949 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_0949 (recJ)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MRBBS_0949 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MRBBS_0949 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MRBBS_0949 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFP29887
UniProt:
M1FD05
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All DBs
Position
997205..998956
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AA seq
583 aa
AA seq
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MEKHLSGMTPKKILRRPQPANVPGWGHDLPPILRRLYAARGVTSDDQLSYTLRHLASPLK
MRGMDRAVELLADAIEKQQRVLILGDFDADGATSTAVALLGLGMLGLKHVDFKVPSRFSD
GYGLTPGIIYRLQEDGPLPDLIVTVDNGIAAVEGVRAARELGMLVVVTDHHLAGDELPQA
DAIVNPNQPGCEFISKNAAGVGVMFYVLTALRKHLREQGRLPNPEPNLGTLLDLVALGTV
ADVVPLDHNNRIFVEQGLRRIRQGETRPGILALLEVAGRDHTAISSSDLGFVVGPRLNAA
GRLDDMSVGIACLLSSSPDEARRLAQELDTFNRERRTIEKDMKIQAQDLLASMSLDLEGL
PWGLALFDPDWHQGVIGILAARIREQTNRPTVAFASDENGEDIKGSARSIPGLHIRDALA
VVDARHPGLLKKYGGHAMAAGMTLAAGDLEAFSSAFDKAVRDKLTAGDLEAAITTDGPLS
ASELNLDTAALLKRAGPWGQHFPEPLFDGEFSVVSQRIVGQNHLKLVLQPAEGGNIIDAI
AFNTGSEVPDYTQTGVRVVYKPDANTFRGRTNLQLMIDYLEPR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaacacctgagcggcatgacccccaaaaagatcctgcgtcgcccccaaccagcc
aatgtgcccggctgggggcacgatttgccgcccatattacgccgcctgtacgccgcccgt
ggtgttacctctgacgaccaactcagctacaccctgcgccacctggcttcgccgctgaaa
atgcgcggtatggatcgtgccgtggaattgctcgccgacgccattgaaaaacagcagcgg
gtgctgatacttggggactttgacgccgacggcgccaccagcaccgccgtcgccttattg
ggcctgggcatgctgggcttaaagcacgttgattttaaagtacccagccggttttcggac
ggctacgggttaacccccggcattatttatcgcttgcaagaagacggcccgctgccagat
ttgattgtaacggtggataacggcatagccgccgtggaaggcgtacgcgccgcccgcgaa
ctgggcatgctggtggtggtcaccgatcaccacctggcgggcgacgaactgccccaggcc
gacgccattgtgaatcccaaccagcccggttgtgagttcatcagcaaaaacgccgccggc
gtaggcgtgatgttctacgtgctaaccgccctgcgcaaacacttgcgcgaacagggccgg
ttgccaaatcccgaacccaatctgggtacattgctggacttggtagccttgggaaccgtg
gccgacgtcgtgccgctggaccacaacaaccgcatatttgtagaacagggcctgcgccgc
atacgtcagggcgaaacccgccccggtatactggcgctgctggaagtagcaggccgtgac
cataccgctatcagcagcagcgatttaggcttcgtagtgggcccgcgcctgaacgccgcc
ggccgcctggacgacatgagtgtgggcatcgcctgcctgctgtcgtcaagcccagacgaa
gcccgccgtttggcacaagagttggataccttcaaccgcgaacgccgcaccatcgaaaaa
gacatgaaaatccaggcccaggatttgctggcgtctatgtcgctggatttggaaggcttg
ccctggggcctggcgctgttcgacccagactggcaccaaggcgtcatcggcatactggcc
gcccgcatccgtgaacaaaccaatcgccccactgttgcgtttgcctcagatgaaaacggt
gaagacataaaaggctccgcccgctccattcctggcctgcacatccgcgatgccctggcc
gtagtggacgcccgtcacccaggcctgctgaagaaatacggcggccacgccatggccgcg
ggcatgactctggcagcgggcgatctggaagctttttccagcgccttcgacaaagccgta
cgcgacaaactaacagcaggcgacctggaagccgccatcaccactgacggccctctaagc
gccagcgaactaaacctggacaccgccgccctgctaaaacgcgccggcccctgggggcag
cacttccccgaaccgctatttgatggcgaattcagcgtcgtcagccagcgcatcgtgggc
cagaaccatctaaagctggtgcttcagcccgccgagggtggcaatattattgacgcgatt
gcctttaatacgggttcggaagtgcctgattacacgcaaaccggggtcagggtggtgtat
aagccggatgccaatacctttcggggcaggacgaatttgcagttgatgatcgattacctg
gagccgcgctga
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