Marinobacter sp. BSs20148: MRBBS_1426
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Entry
MRBBS_1426 CDS
T02323
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03030
DNA replication
mbs03430
Mismatch repair
mbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRBBS_1426 (dnaE)
03430 Mismatch repair
MRBBS_1426 (dnaE)
03440 Homologous recombination
MRBBS_1426 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_1426 (dnaE)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_1426 (dnaE)
Enzymes [BR:
mbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRBBS_1426 (dnaE)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MRBBS_1426 (dnaE)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MRBBS_1426 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
PPP1R21_C
Motif
Other DBs
NCBI-ProteinID:
AFP30364
UniProt:
M1FEE2
LinkDB
All DBs
Position
1521367..1524852
Genome browser
AA seq
1161 aa
AA seq
DB search
MTAQTFVHLRIHSEHSLVDGLVRVKPLIKRVVELGMPAVGLTEQSNMFSLVRFYKAALGA
GVKPIIGADLWFENLDEPESPFRITLLASNNDGYLNLTEIVSLGYTEGQRFGKPIIKREW
LEARSQGLIMLSGGKMGDVAKAMLADKPKLARDRARYWRDLYPGSFYLELQRTGRAGDED
CLHLNVALAAELGLPVVATNDVHFIYAEDFEAHEARVCIGESRTLDDPRRDRRFSDQQHL
RSAEEMIELFADIPEAVENTLAIARRCSVTVRMGEYFLPNYPVPEGMTMDDYFRRVSEEG
LEDRLAKTLPKDDPDYDRKRQAYYDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYAQLITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIAYV
AEKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEVGMTLAKAVEQE
PSLKEFLAQDEEAQEIWEMAIKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDDGGSLV
TQFDKNDVEDAGLVKFDFLGLRTLTIIDWALKMINPRREKRGLKPLDISEIPLDDPASFV
MLKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGK
QPMSFPHPDFQYEGLKPVLEPTYGVILYQEQVMQIAQVMGGYSLGNADMLRRAMGKKKPE
EMAKQKQFFLDGCAGNNIDKALAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKSHY
TAEFMAAVLTADMQNTDKVVTLVEECRSLKLDLVLPDVSTSEYAFTANDDGQVVYGLGAI
KGLGEGPIDSIVTARKENGPFTDLFDFCRRVDLKKVNKRALEAMIRAGAMDKLGAGRAQL
MASIEKAILQAGQQSRNEAAGMVDMFGDMLETAMDVDAYSDVADIREWPEKKRLKGEKDT
LGLYLTGHPFDEYEREVRRFVRSSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFVTL
DDRSGRIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQIKMRVNSVMDVASARQQ
FSRGLQLKLNQSQLDNGLLDSLEQLLAPHRCEGSPVWIEYTSPAASTRIELGSSWRVEPN
DSLLLELKYLVGDRSVELVYD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccaaacctttgtacatcttcgcattcactctgaacattccttggtggatggc
ctggtacgggtaaagccgttgatcaaacgtgtggtggagctgggtatgcctgccgttggg
ctcaccgaacagtccaatatgttctcgctggtgcgattttacaaagccgcgcttggcgct
ggggtgaagcccattattggcgccgatttgtggttcgaaaacctggacgagccagagagt
ccgtttcgcataaccctgctggccagcaataacgacggttacctgaacctaaccgaaatt
gtttcgctgggttacaccgaaggtcagcgttttggcaagcccattattaagcgcgaatgg
ctggaagcccgaagccagggcttgattatgctctcgggtggcaaaatgggcgatgtcgcc
aaggccatgctggcagacaaacccaaacttgctcgcgaccgggctcgctattggcgtgac
ctttaccccggcagtttttatctggaacttcagcgtactggccgtgcaggtgatgaagat
tgcctgcacctgaatgtggcgctggcggctgaattaggcttgccggtggtggccaccaac
gatgtccactttatttatgcggaagacttcgaagcccacgaagcgcgggtatgcattggc
gaaagtcgcactctggacgatccgcgccgcgaccgccgctttagtgaccaacagcacctg
cgcagcgctgaagaaatgatcgagctgtttgccgacattcccgaagccgtggaaaacact
ttggccatcgctcgccgctgctcggtcaccgtgcgcatgggcgaatactttttgcccaac
tatcctgtgcctgaaggcatgaccatggacgattactttcgccgtgtgtcggaagaaggg
ttggaagatcgtctggccaaaaccctgcccaaagacgatccggattatgacagaaagcgc
caggcctattacgaccggctgaaatttgaactggatatcatcatccagatgggttttccc
ggctactttctgatcgtgatggactttatcaagtgggcaaagaacaacggcgtgccggta
ggaccgggccgtggttccggtgccggttctctggtggcttacgctcagttgattacagac
ctggacccgctgcaatacgatctgctgtttgagcgctttttgaaccccgaacgggtctcc
atgcccgacttcgatgtcgacttctgtatggaaggccgtgatcgggtaatcgcctatgtg
gccgaaaaatacggtcgcgaagcggtatcgcagataattacgttcggtactatggccgcc
aaagccgtggtgcgtgacgtagcgagggtacagggcaagtcttacgggctggcggacaaa
ctgtccaaaatgatcccgtttgaagtgggtatgaccctggccaaggccgtagagcaggaa
ccgtcactcaaagagtttctggcgcaggatgaagaagcccaggaaatctgggaaatggcg
atcaagcttgaaggcgtgtgccgtaacgctggcaagcacgccggcggtgtggtgatagca
ccaaccaagatcaccgacttttcgccgctgtattgcgacgacgacggcggcagcctggta
acccagttcgacaaaaacgatgtggaagatgccggcctggtgaagttcgactttctcggc
ctgcgcaccctgaccatcatcgattgggcgctgaagatgatcaatccgcggcgggaaaag
cgcgggttaaagccgttggacattagcgaaattccgctggacgacccggcgtcgttcgtg
atgctgaaaaaagccgaaaccaccgccgtgttccagctggaatcccgcggtatgaaagac
ctgatccggcgcctgcaaccggattccctggaagacatgatcgccctggtggcgctgttc
cgcccaggcccgctgcaatcgggcatggtagacgactttattgaccgaaagcatggcaag
cagccgatgtctttcccacacccggattttcagtatgaaggcctgaagccggtattggag
cccacttacggggttatcctgtaccaggaacaggttatgcagatcgcccaggtgatgggg
ggttacagtctgggtaacgcggacatgctgcgccgcgcaatgggtaagaaaaaacccgaa
gaaatggccaagcagaagcagttttttctggatggctgtgctggcaataatattgataag
gccttggcggaaaacatcttcgacctggtggaaaagtttgccggttacggcttcaacaaa
tcccactccgccgcctatgcactggtgtcttaccaaaccctttggctaaagtctcactac
accgccgagtttatggctgccgtgcttaccgctgatatgcagaacaccgacaaggtggtt
acgctggtggaagagtgccgtagcttgaaactggatttggttttgccggatgtaagtacc
tcggaatacgccttcaccgctaatgatgatggccaggtggtgtatggcctcggtgcaatc
aaaggccttggcgaaggccccattgacagcattgttacggcgcgcaaagaaaatgggccg
ttcaccgacttgttcgacttttgccgccgggttgatctgaaaaaggtcaacaaacgtgcg
ctggaagcgatgatccgcgctggcgctatggacaagttaggcgccggccgcgctcaactg
atggccagtatcgaaaaagccatactgcaagcgggccagcagtcgcgtaatgaagccgcc
ggtatggtggacatgtttggcgatatgttggaaaccgctatggacgtagatgcctacagc
gatgtcgccgatattcgtgagtggccggaaaagaaacgtcttaagggtgaaaaagacacg
cttggtctatacctgacaggccatccatttgatgaatatgagcgcgaggttcggcgcttc
gtgcgctcatccatcgccgacctgaaacccaataaatcgccacaacgggtagccgggctg
gtggtggcgcagcgcaccatgaaaacgcgcaccggttctaccatgtgttttgttaccctg
gatgatcgcagtgggcgcatcgaagcgacgcttttttccgaggcgttttttgaaaaccgc
gagctgttgcagtcagatcaggtgattgtagtggaaggtcaggtcagccacgatgactac
tccgggcagataaagatgcgggtcaattcggtgatggacgtagccagcgcccgccagcaa
ttcagccgcggtttgcagctgaaactgaatcaaagccagctagacaatggcctgctggat
tcactggaacaattgctggcgccgcatcgctgcgaaggcagcccggtgtggattgagtac
accagtccggccgccagcactcgtattgagttgggttcatcctggcgggtagagcccaac
gacagcctgttgctggagttgaaatacctggtgggcgaccgtagcgtggaactggtctat
gattga
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