Marinobacter sp. BSs20148: MRBBS_1435
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Entry
MRBBS_1435 CDS
T02323
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mbs
Marinobacter sp. BSs20148
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbs03016
]
MRBBS_1435 (truD)
Enzymes [BR:
mbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MRBBS_1435 (truD)
Transfer RNA biogenesis [BR:
mbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MRBBS_1435 (truD)
Prokaryotic type
MRBBS_1435 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFP30373
UniProt:
M1FIK1
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All DBs
Position
1533089..1534180
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AA seq
363 aa
AA seq
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MNDTQNATPVPVQGHNWRLQWPSSTGKCAASADVKHCANDFQVSEVLDKASIQGENGSGN
AGEHLCLRLQKTGDNTEYVARELAAMADLRPFDVSFCGLKDRHAVTWQWFSLYRPGQNDS
DADFIASVSEHWPVTDSCRSASKLRRGDHSGNGFRIILRNVAGEQGAIDQALERLTRSGA
PNYFGPQRFGHNGANLDNALLLNPRSLNRPAKGRGKGRGRGGRSSQDSKNVLYFSAARSW
LFNEVLAARVNNGSWCQSMAGEPDEQRVTGPLWGDGGTRATGEQEQLERSAVAANPQLAA
LFGSTRMQPERRPLQLVPQNLNWEWQDSTTLAIEFTLGAGQYATTLLADVFALQDLALSR
LNE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatactcaaaacgccactccagtcccggtgcagggccataactggcgcctgcaa
tggccatcatctaccggcaagtgcgcggccagtgccgatgttaaacactgtgcaaacgac
ttccaggttagtgaagttctggacaaggccagcattcagggcgaaaacggcagcggaaac
gccggcgagcacttatgcttgcggttgcaaaaaaccggcgacaataccgaatatgtcgcc
cgtgagctggcagcgatggccgatttacgcccctttgacgtgagtttttgcggcctcaaa
gatcgccatgccgtgacatggcagtggttcagcctttatcgccctggccagaatgacagc
gatgcagattttatcgccagcgtcagcgaacactggccagtaacagacagttgtcgcagt
gcgagcaaattgcgccgcggtgatcacagcggtaatggctttcgtattattttgcgcaat
gtggctggcgagcaaggcgctatcgatcaggcactagagcgtttgacacggtccggcgcg
cccaattattttggtccccagcgctttggccataacggcgccaatctggacaacgcgttg
ttgttgaatccgcgctcgttgaatcgtcccgctaagggtcgtggcaaaggccggggtcgt
ggcggccgtagcagtcaagattcgaaaaatgtattgtatttttccgctgcccgctcgtgg
ctgtttaatgaagtgctggccgcgcgcgtcaacaatggtagctggtgccagtccatggct
ggcgagccggatgagcagagggtcacaggcccgctgtggggcgatggtggtacccgcgcg
accggcgaacaggaacagcttgagcgctcggcggtggcagccaacccgcagttagccgcg
ctctttggcagcacgcgcatgcagccggagcgcagacccctgcaactggtgccgcaaaac
ctgaattgggaatggcaagacagcaccacactggcaatcgaatttacgttgggcgctggc
cagtatgcaacaacgctgctggcagacgtttttgcgttgcaggatcttgccctgagtcgg
cttaacgaataa
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