Marinobacter sp. BSs20148: MRBBS_1701
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Entry
MRBBS_1701 CDS
T02323
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbs
Marinobacter sp. BSs20148
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_1701 (topA)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_1701 (topA)
Enzymes [BR:
mbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MRBBS_1701 (topA)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Topoisomerases
MRBBS_1701 (topA)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MRBBS_1701 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AFP30638
UniProt:
M1FJ53
LinkDB
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Position
1812001..1814640
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AA seq
879 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGDDFIVKSSVGHIRDLPVSGSGSTSDPKERARQAAVTRK
LSPEDKVVHKKRKAREQLVARMGIDPDQDWSARYEILPGKEKVVNELKRLAKSADHIYLA
TDLDREGEAIAWHLQQTIGGEPEKYRRVVFNEITKRAIQGAFENPGKLDTDMVHAQQARR
FLDRVVGYMVSPLLWAKLARGLSAGRVQSVAVKLIVEREREIRKFVPEEYWQLFAGLATL
SAKQPVRFEVTRYNDKPYRPVNESQSNDHVTRLNAGKFAVTKREDKPTRSRPGAPFITST
LQQAASNRLGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQDAVNSSREYVESTFGKEYL
PDSPRIYGSKQGAQEAHEAIRPTEATRKAVAITGIEKDAEKLYDIIWRQFIACQMADAEF
LSTSIVVSNGDYELRTRGRISKFEGFLKVAPQASKKDEDLALPDIRVGESLGLDKLEPTQ
HFTKPSPRFTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGEIVTE
RLCESFGNLMDYNFTAQMEGDLDHVAEGNVEWKKVLNDFYGRFRQQLEVAEADDDDGGMR
PNEPTETDIPCPTCGRNMQIRVASTGVFLGCSGYSLPPKERCKTTINLVTGDEVVSAEED
VEGEGESRLLRMKRRCPKCSTAMDSYLVDETRKLHVCGNNPDCSGYEVEQGSFRIKGYDG
PTLDCDKCGSEMQLKTGRFGKYFGCTNDECKNTRKLLKSGEPAPPKMDPVAMPELQCQKV
DDTYVLRDGASGMFLAASKFPKNRETRPPLVLEIKPHRDEIDPKHNYLMEAPERDTEGNP
SVIRYSRKTKEQYVMSEKDGKATGWSAWYVSGKWQPKQK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagtctcgtaattgtcgagtcgccagcgaaggcgaagaccatcaataagtat
ctgggggacgacttcattgttaagtcgtccgtcgggcacattcgtgatcttccggttagc
ggcagcgggtccaccagtgaccccaaagagcgtgcccgccaagccgctgtcacgcgtaaa
ttgagccctgaagataaggtggtgcacaagaagcgtaaagcgcgtgaacagctggtcgcc
cgcatgggtatagacccggatcaagactggagcgcgcgctatgaaattttgccgggtaaa
gaaaaggtcgttaatgagctgaaacgcctggccaagtctgccgatcacatttatctggca
acggatttggaccgcgaaggtgaggccattgcctggcatcttcagcagaccattggcggc
gagccggaaaaataccggcgcgttgtttttaacgaaattactaaacgtgctattcagggc
gccttcgaaaacccaggcaagctggacaccgatatggtgcatgcccagcaggcacggcgt
ttcctggatcgggtagtcggttacatggtgtcgccgctgctttgggccaagttggcccga
ggcttgtccgccggccgtgtgcaatcggttgcggtaaagctgattgttgaacgtgaacgg
gaaattcgtaagtttgtgccggaagagtactggcagctgtttgcaggcctcgcaacccta
agcgccaagcagccggtgcgttttgaagtgacccgctacaacgacaaaccctatcgcccg
gttaacgaaagccagagcaacgaccacgtcacgcggttaaacgcgggcaagtttgcggtg
accaagcgggaagacaagcctacccgttcgcgcccgggtgctcctttcataacgtcgacg
ttgcagcaggctgccagtaaccgcttgggctttagtgttaagaaaaccatgatgctggct
cagcgtttgtacgaagccggatttatcacctacatgcgtacagactccaccaacctgagc
caggatgcagttaacagcagccgtgagtacgtagagtcgacctttggcaaagaatacctg
ccggacagcccgcgcatctatggcagcaagcaaggcgctcaggaggctcacgaggctatt
cgcccgactgaagctactcgtaaggcggttgctattaccggtatcgaaaaagacgccgag
aagctttacgacatcatttggcgccagtttatcgcttgccaaatggccgacgccgaattt
ctcagcacgtctatcgtcgtctccaacggcgattacgagctgcgcacccgtggccgcatc
agcaagtttgaaggctttttgaaagtggcgccccaggcgtcgaaaaaagatgaagattta
gcactgccagatatccgtgttggcgagagcctcggcttggacaagctcgaacctacccag
cattttaccaagccgtcaccgcgcttcactgaagcgagcctggttaaagagctcgaaaag
cagggtattggccggccgtctacttacgcctcaatcatttcgaccattcaagatcgtggt
tacgtgcgcctgcagaaccgtcgcttttacgctgaaaaaatgggcgaaattgtgactgaa
aggctgtgtgaatccttcggtaacctgatggattacaattttactgcacaaatggaaggt
gatctggaccatgttgcggaaggcaatgtggaatggaaaaaagtattaaatgatttttat
ggccgtttccggcaacaactggaggtggctgaagcggatgacgacgacggcggcatgcgg
cctaacgagcctacggaaacagatattccgtgtcctacgtgtggtcgaaatatgcaaatt
cgcgtggccagcaccggtgtttttctgggttgctcgggctactcgctaccgccgaaagag
cgctgtaaaaccaccattaacctggtgaccggtgacgaagtggtcagtgctgaagaagac
gtggaaggtgagggcgaaagccgcctgttacggatgaagcgtcgctgccccaagtgcagc
acggccatggacagctacctggtagacgaaacccgtaagcttcacgtgtgtggcaataat
ccggattgctccggttatgaagtcgaacagggcagtttccgtattaagggttacgatggc
ccaacgttggactgcgataagtgcggcagcgaaatgcagctgaaaaccggtcgtttcggt
aagtattttggctgcaccaacgatgagtgcaaaaacacccgtaagttgctgaaaagtggt
gagcctgcaccgccaaagatggatccggtggcgatgccggagttgcagtgccagaaagtg
gatgacacctatgtgttgcgcgatggcgcgtctggcatgttcctggcagccagcaagttt
cccaagaatcgggaaacccgtccgccgctggtactggaaattaaaccccatcgcgatgag
attgatcccaagcacaactacttgatggaagcaccagagcgcgatactgagggtaatccg
tcggtgatccgctacagccggaaaaccaaagagcagtatgtaatgtcagaaaaagatggc
aaagcgactggttggtcggcttggtacgtgagcggtaagtggcagcctaaacagaagtga
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