Marinobacter sp. BSs20148: MRBBS_2246
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Entry
MRBBS_2246 CDS
T02323
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs00250
Alanine, aspartate and glutamate metabolism
mbs00310
Lysine degradation
mbs00350
Tyrosine metabolism
mbs00650
Butanoate metabolism
mbs00760
Nicotinate and nicotinamide metabolism
mbs01100
Metabolic pathways
mbs01120
Microbial metabolism in diverse environments
Module
mbs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MRBBS_2246 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MRBBS_2246 (gabD)
00310 Lysine degradation
MRBBS_2246 (gabD)
00350 Tyrosine metabolism
MRBBS_2246 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MRBBS_2246 (gabD)
Enzymes [BR:
mbs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MRBBS_2246 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MRBBS_2246 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MRBBS_2246 (gabD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
BsNagA_N
Motif
Other DBs
NCBI-ProteinID:
AFP31183
UniProt:
M1FK75
LinkDB
All DBs
Position
complement(2385700..2387169)
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AA seq
489 aa
AA seq
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MTISLANPKLLCESAYVNGSWVQAQSGEVFSVINPANGECLATVPDMGAEDTALAIRAAE
AAWPEWRARTAKERAGILGRWFDLVMHHQEDLARLMTAEQGKPLAEARGEVAYGASFIEW
FAEEAKRAYGDVIPGHGRDKRIIVIKQPIGVVAAITPWNFPVAMITRKVAPALAAGCPVV
VKPAEDTPLCALALAVLAAEAGVPAGIFNVITCSKARAPEVGEELTTSPIVRKVSFTGST
PVGKLLMRQASGTVKKVSLELGGNAPFIVFDDADLDAAVNGLMASKYRNTGQTCVCANRI
YVQSGVYDAFVEKLKIAVSKMVVGAGLDGETHQGPLINQAALDKVKRHISDATTKGAKVV
LGGQTHTLGGTFFEPTILTDVTQEMVIASEETFGPVAPLFRFDTEEQAIAMANNTEFGLA
AYFYSNDIRRIWHVAEALETGMIGINDGIISTEAAPFGGIKESGLGREGSRYGLDEFMEL
KYLCLGSMR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgactattagtttagcgaacccgaaactcttgtgtgaaagtgcttacgttaacggaagt
tgggttcaggcccaatccggtgaggttttctcggttatcaatcctgccaatggagagtgc
ttggctactgtgccggacatgggtgcagaagacacggcgttggcaattcgagctgcggag
gctgcatggccggaatggcgcgcacgaacagccaaggagcgtgcgggtatccttggccga
tggtttgatctggtgatgcatcatcaggaagacctggcacggctgatgaccgccgaacag
ggtaaaccacttgcggaagcacggggcgaagtggcctatggggcgagttttatcgagtgg
tttgccgaggaggccaagcgagcctatggcgatgttattccgggtcacggtcgggataag
cgaattattgttatcaaacagcctataggggtggtagcagccatcacgccgtggaacttt
ccagtggcgatgattactcgcaaagtagcgcccgcgcttgcagcgggttgccctgttgtc
gtcaagcctgcggaagatacacccttgtgcgccctcgcgttggcggtgctggcagcggag
gcgggagttccagcaggaattttcaatgtaataacctgctctaaagcccgagcgccggag
gtgggtgaggagttaacaacgagcccgatcgttcgcaaagtatcgttcaccggctcaacg
ccggttggcaagttgctgatgcgccaggctagcggcactgtcaagaaagtgagcctggag
ctgggcggcaatgccccgtttatcgtcttcgacgatgcggatcttgatgcggcagtaaac
gggcttatggcatccaaatatcgcaataccgggcagacctgtgtctgcgccaaccgtatc
tatgtccagtctggagtttatgacgcctttgttgagaaactaaagattgctgtcagcaag
atggttgtaggtgcaggtctcgacggtgagacgcatcaggggccgttgatcaatcaggca
gctctggacaaggtcaagcggcatatttctgatgcgacgactaagggagcgaaagtcgtt
ttgggagggcaaacacacacgcttggcgggacatttttcgagcctaccatccttacggat
gtgacgcaggaaatggtgatagccagtgaagagacgtttggcccagtggcgccgctgttt
cggtttgatactgaagagcaggcgatcgccatggccaataacacggagtttggtttagct
gcctacttctacagtaatgatataagacgcatatggcatgtggctgaagctcttgaaact
ggcatgatcggtatcaacgacgggattatttctacagaggcggccccctttggcggtatt
aaggaaagcggacttggccgggaaggttcacgatacggcttggatgagttcatggaactc
aaatacctatgtctcggtagcatgcgttag
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