Marinobacter sp. BSs20148: MRBBS_2387
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Entry
MRBBS_2387 CDS
T02323
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRBBS_2387 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbs03019
]
MRBBS_2387 (rhlB)
Enzymes [BR:
mbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRBBS_2387 (rhlB)
Messenger RNA biogenesis [BR:
mbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MRBBS_2387 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
LpdD_chaperone
CBFD_NFYB_HMF
MimR_N
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AFP31323
LinkDB
All DBs
Position
complement(2519638..2521029)
Genome browser
AA seq
463 aa
AA seq
DB search
MTIDNNPTDSNPTSAADNNISSASDSPVIDSPTVDRSHTSDLRFSDLNLDHRLQQAIAAI
GFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQTMLETPIEDSKRFASEPR
VLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVGGMHYDKQRDQLQNEVVDILVATPGRL
IDFLGSQDVFLDQIDILILDEADRMLDMGFIPDVKRIIRKCTPKEDRQTLLFSATFNQDV
LNLASMWTQSAEFVEIEPEQKTAERVEQTVYLVGDDEKLRVLVNYLKRPEVDKALVFANR
RDQCRDLEEDLRNQGVSVSLMSGEIAQAKRLKTLEQFKAGSIQVLVATDVAGRGIHVNGV
THVFNYNLPDNAEDYVHRIGRTGRAGSTGVSISFAGEDDSFALPAIEKYIGQKLANEVPD
EALMVPMDNAPIARKRGRRPQGTRPTGNRSSGNRSGNSRPRRS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgataataatcctaccgacagcaacccgacgtctgctgctgacaacaacatc
tccagtgctagtgacagtcccgttattgacagtcctactgttgatcgcagtcatacctct
gatttgcgttttagcgacttgaatctggatcatcgcctgcagcaggccattgccgccata
ggctttgagtactgcactccgatacaggctgaaaccctgccttggaccctggcctgccag
gacctgatcggccaggctcagaccggcaccggcaaaaccgccgcgtttctgattaccgcg
atccagaccatgctggaaaccccgattgaagacagcaagcgttttgcctcggagccgcgg
gttctggcgctggcgcccacccgtgaattggcgatgcaaatcgccaaagacgccgagcag
ttgtgtgcccataccggccataaagtcgtgaccgtggtgggtggtatgcactacgacaag
cagcgtgatcagttacagaacgaagtcgtggatattctggtggcaacgccgggccggcta
atcgattttctggggtctcaggacgtgtttcttgaccaaatcgatattctgattcttgac
gaagccgaccgcatgctcgatatgggctttattccggatgttaagcgcatcattcgcaag
tgtacgccaaaggaagatcgtcaaacgctgctgttcagcgcgacgtttaaccaagatgta
ctgaatcttgcctctatgtggacccaaagcgccgagtttgtggaaattgagccggaacag
aaaaccgccgagcgggttgaacagaccgtatacttggtcggcgatgatgaaaaactgagg
gtgctggtgaattatctgaagcgcccggaagtggacaaggcgctggtgttcgccaatcgc
cgtgaccagtgccgtgatttagaagaagacctgcgcaatcagggggtctctgtttcgctg
atgtctggcgagattgcccaagccaaacgcctgaaaacccttgagcagttcaaggccggc
agcattcaggtgctggtggctacagacgtcgcaggccgtggtatccacgttaatggcgta
acccatgtgttcaactataatctgccagacaacgccgaagattacgtacaccgtatcggc
cgcaccggtcgtgccggcagcaccggcgtgtctatcagctttgccggcgaagacgactct
ttcgccctgccggcgattgaaaagtacatcggccagaagcttgctaacgaggttccagac
gaagcgttgatggtgccgatggacaacgctccgatcgcccgtaaacgcggtcgtcggcca
cagggcacgcgcccgaccggtaaccgtagcagtggcaaccgcagtggcaatagccggccg
cgcagaagctga
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