Marinobacter sp. BSs20148: MRBBS_2730
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Entry
MRBBS_2730 CDS
T02323
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03030
DNA replication
mbs03430
Mismatch repair
mbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRBBS_2730 (holA)
03430 Mismatch repair
MRBBS_2730 (holA)
03440 Homologous recombination
MRBBS_2730 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_2730 (holA)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_2730 (holA)
Enzymes [BR:
mbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRBBS_2730 (holA)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MRBBS_2730 (holA)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MRBBS_2730 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
HP_1247_M
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
AFP31666
LinkDB
All DBs
Position
2896052..2897056
Genome browser
AA seq
334 aa
AA seq
DB search
MKTTPAQLPQSLKKGLAPVYLVSGDEPLLVQECCDQIRKVARDQGFLDRLTFHADNHFDW
NIVADEVNAMSLFAEKRRIEVHLPTGKLGDGRAVMERILAQPADDIVLLLISARLDAAET
RRKWYKDLQGKGLHVPVWPVDADKFSGWLQQRAASRGLTLTRDALAILAERLEGNLLAAS
QELERLALFSKGATIDESLVEQAVQDSSRFNGFELVSELLTGNASHACKMIGILQQEGEN
PLGLLTVLARDIHLLLELKAAGQNTAPAAFFKKRGVFQPQRAKTLEQAAKRLNRSQLNNA
IHLCSEVDRAAKGFDPLGPWHYLRDMSALLVSRS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacaccggcgcaactgccccaaagccttaagaaaggcctggcgccggtgtac
ctggtatccggtgacgaaccgctattggtgcaagaatgctgcgatcagatccgtaaagtc
gcccgcgatcaaggatttctggaccggctcacctttcacgccgacaaccattttgactgg
aacatcgtggccgatgaagtcaacgccatgtcattgttcgccgaaaaacgtcgcatcgaa
gtccacttaccaacaggcaagctaggtgacggccgcgccgtaatggaacggatactcgcg
caacccgccgacgacattgtgttgctgctgatcagcgcccgtctggatgcggctgaaacc
cgccgtaaatggtacaaagacctgcaaggcaaaggcctgcacgtgccggtatggccggta
gacgctgacaagttttccggctggttacaacagcgcgccgccagtcgtggtctgactcta
acccgcgacgctttggcaatactggcggagcggctggaaggcaatctgctggccgccagc
caggaactggaacgcctggcgctattcagcaagggcgcaactattgacgaaagcctggtg
gaacaggctgtgcaggacagctcgcgttttaacggttttgaactggtcagcgaactgctg
acggggaatgcgtcgcacgcctgcaaaatgatcggtatattacaacaggaaggcgaaaac
ccgcttggcttgctcaccgtgctggcgcgggacattcatctgctgctggaactgaaagcc
gccgggcaaaacaccgcacctgctgctttttttaaaaaacgcggagtcttccagccgcag
cgggcaaagaccctggagcaggcggcaaaacgcctcaaccgttcacaactgaataacgcc
attcacctgtgcagcgaagtggaccgcgcagccaaaggcttcgacccactgggcccctgg
cactatttaagagacatgtccgcgttacttgtcagcagatcctga
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