Marinobacter sp. BSs20148: MRBBS_3632
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Entry
MRBBS_3632 CDS
T02323
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbs
Marinobacter sp. BSs20148
Pathway
mbs03420
Nucleotide excision repair
mbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MRBBS_3632 (pcrA)
03430 Mismatch repair
MRBBS_3632 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_3632 (pcrA)
Enzymes [BR:
mbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MRBBS_3632 (pcrA)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MRBBS_3632 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MRBBS_3632 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_22
AAA_12
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AFP32568
UniProt:
M1FMI8
LinkDB
All DBs
Position
3796637..3798973
Genome browser
AA seq
778 aa
AA seq
DB search
MPQQPPATDYQHQPHTAAPALANPAAQIPLPEFLTNEQRNIISAGFEHAVITAVAGSGKT
TTLAWRIRYLLHQGHDPARMLVLMFNRSAKMDFERKLQAVCGNSGLALPEIRTYHAMGLR
LYRRFVREGYLPNFSANILSDQEINYQVFQLSRRLVPEDLAEELRRNKKEFIETAIGFID
RVKTSLSPAEIVFEDMEFTERQRYLIDLFHSFEQWRKGQSRISFADMLYEPVMAIHQNPP
LQRLVANKMDLILVDEYQDTNEIQHLLLRYVAGDRARVTVVGDPDQTIYEFRGAKPEFIL
RRFSDEFESPLEQTLSYSFRYGHRVALLANHLIHNNSGRKDLLCHAHPSTPATIITLHRH
DNDADTVLQLLQVMTAEQLTNTAILFRVWSQSVAIELKLLARQVPYRIDAGKGALFSREV
QAIIALLQIVTGQLTQLPDSDRLELARQLLRFPHVGLKEPELDQLARYLAGFGEDWAQRI
LAMDFNALAPMAARKLRKLAETLNQLSGYRGPVAGLISVYADSTDLYDGIRSLALTHDNA
EERINTIHGFRQYLKSLDINAEKALAHLHTLKQQAGAHRNDGQNTKPVGVLLSTIHRTKG
LEWPTVIVPGLQEKYLPYSPRAEDNLRAHLESERRLLYVAITRSRQQLHLITRPASSRPH
LDGEQGPSRFVAECCFELSDELGGALHQLEGSNAITLNAPLTAISERYGRRVGITLSGDA
SQECNDQPLWQRERLQHAIFGAGTVVSEDERAFEVRFDNGDTLNFSKQSAHLYFSTLS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcaaccacccgctaccgattaccagcatcaaccccacactgccgccccggcc
ctggcgaatccagcggcacaaatccccctgcccgagtttctgactaatgagcaacggaac
attatcagcgccggctttgaacacgcggtgattaccgcggtcgccggcagtggcaaaacc
acaaccctggcctggcgtattcgctatctgctgcaccagggacacgatcccgcccgcatg
ctagtgctgatgttcaaccgcagcgccaaaatggatttcgaacgcaaactgcaagcggtg
tgcggcaatagcggcttggcgctgccggaaatacggacctatcacgccatgggcctgcgg
ctttaccggcgctttgtgcgagagggctacctgcccaatttttccgctaacattctcagc
gaccaggaaattaactatcaggtgtttcagctcagtcgccggctagtgccggaagacctg
gcagaggagctgcggcggaataaaaaagagtttatagaaaccgccatcggctttattgac
cgggtgaaaaccagcctttcgcctgctgaaatcgtgtttgaagacatggaattcacagaa
cgccagcgctatctgattgacctgttccacagtttcgaacaatggcgcaaaggccagagc
cgtatcagttttgccgacatgctgtacgagccagtcatggccattcaccagaacccaccc
ctgcaaaggctggtggccaataaaatggacctgattctggtcgacgagtatcaggacacc
aacgaaattcagcacttgctgctgcgctatgtagccggcgaccgggcccgggtaaccgta
gtgggcgatccagaccaaaccatctacgaatttcgtggtgccaaaccggagtttattttg
cgccgcttcagcgacgagtttgaaagcccgctggaacaaacactaagctacagcttccgc
tatggccaccgggtagcgctgctggctaaccacctgattcacaacaacagtggccgtaag
gacttactgtgccatgcgcatccgtctacgcctgccaccatcattaccctgcatcgccac
gacaatgacgccgataccgtgttgcagctgctgcaggttatgacagcagaacaactgacc
aataccgccattctgttccgggtatggagccaaagcgtggccattgagctgaagctattg
gcgcggcaagtgccctaccgtattgatgccggtaaaggagcgctgttcagccgcgaagtt
caggcgattatagcgctgctgcagatagtaaccggacagcttacgcaattacccgacagc
gaccgcctggagttggcgcggcaactgctccggtttccccacgttggcctgaaagagccg
gagctggaccagcttgcacgctatttggccggttttggcgaagactgggcacaacgcata
ctggcgatggactttaacgccttggctcccatggccgcccgcaagctgcgcaaactggca
gaaacactgaaccagctcagtggctatcgcggcccggtggccgggctgatcagcgtgtac
gctgacagcaccgacctgtacgacggcattcgcagtctggccctgacccacgacaatgcg
gaagagcgaatcaacaccattcacggctttcgccaatacctgaaaagcctggatattaac
gccgaaaaagctcttgcccacctgcacacgctgaagcaacaagccggcgcccaccgcaac
gacgggcaaaacaccaagcccgtcggcgttctgctgtcgaccattcatcgcaccaagggt
ctggagtggccgacggtgatcgtgcccggtcttcaggaaaagtacctaccttatagccca
cgcgccgaagacaacctacgcgcccacctggaaagtgaacggcgcttgttgtacgtagcc
attactcgcagcaggcagcagttgcacttaatcacgcgccctgcaagcagccgtcctcac
ctggacggcgaacagggccccagccgctttgttgcagagtgttgttttgagctatccgat
gaactgggcggcgctttgcatcaattggaaggcagcaatgcgatcacgctgaacgccccg
ctaacggctatcagcgagcgttacggtcgccgcgtaggcataaccctgagcggcgacgca
agccaagaatgcaatgaccagcccctatggcagcgggaacggctgcaacacgccatattt
ggcgctggaaccgttgtcagcgaagatgaaagagcctttgaggttcgatttgataacggc
gatactctcaatttcagcaagcaaagcgctcacctctacttcagcacgttaagttaa
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