Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_0240
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Entry
JTY_0240 CDS
T00864
Symbol
gabD1
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+) dependant
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt00250
Alanine, aspartate and glutamate metabolism
mbt00310
Lysine degradation
mbt00350
Tyrosine metabolism
mbt00650
Butanoate metabolism
mbt00760
Nicotinate and nicotinamide metabolism
mbt01100
Metabolic pathways
mbt01120
Microbial metabolism in diverse environments
Module
mbt_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JTY_0240 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JTY_0240 (gabD1)
00310 Lysine degradation
JTY_0240 (gabD1)
00350 Tyrosine metabolism
JTY_0240 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JTY_0240 (gabD1)
Enzymes [BR:
mbt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JTY_0240 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JTY_0240 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JTY_0240 (gabD1)
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GFIT
Motif
Pfam:
Aldedh
Acetyltransf_6
LuxC
fvmX5
Motif
Other DBs
NCBI-ProteinID:
BAH24538
LinkDB
All DBs
Position
complement(277968..279503)
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AA seq
511 aa
AA seq
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MRSVTCSATLVLPVIEPTPADRRPRHLLLGSAGHVSGRLDTGRFVQTHPAKDVSVPIATI
NPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEAEADQAA
AMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGRYQPLGV
ILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTL
LVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADL
DAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGP
LATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGP
VASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMTVSYPEL
PFGGVKRSGYGRELSAHGIREFCNIKTVWIA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcggtgacatgttccgccacgctggtcctgcccgtgatagagcccaccccagcc
gataggaggccccgacacctcctgctcgggagcgctggccacgttagtggcaggctggac
accggacgatttgtgcaaacccacccagcaaaggatgtcagcgtgcccatcgccaccatc
aacccggctaccggcgaaacagtcaagacattcactgcggcgaccgatgacgaagtcgac
gcggcaatagcccgggcccaccggcggttcgccgactaccgccagaccagcttcgcccag
cgcgcccggtgggccaatgccaccgccgacttgctggaagccgaggccgaccaggccgcc
gcgatgatgacgctcgagatgggcaagacgctggccgcggccaaagccgaggcactgaag
tgcgccaagggttttcgctactacgccgaaaacgccgaggcgttgctggccgacgaaccc
gccgatgcggccaaggtcggggcgtcggcggcctacggccgataccagccgctcggggtg
atcctggcggtgatgccatggaacttccccctgtggcaagcggttcggttcgccgcaccg
gcactgatggccggaaacgtcggcctgctcaagcacgcgtcgaacgtgccgcaatgcgcg
ctgtacctggccgacgtcatcgcccgaggcggcttcccggacggctgcttccagacgttg
cttgttagctcgggagccgtcgaagccatcctgcgtgatccccgggtcgcggcggccacg
ctgaccggaagcgagccggccggccaatcggtgggcgctatcgccggtaacgagatcaag
ccgaccgtgctcgagctcggcggcagcgacccgttcatcgttatgccgtcggccgatctg
gacgccgcggtcagcaccgccgtcaccggccgggtgcagaacaacggccaatcctgcatc
gccgccaagcggttcatcgtccacgccgacatttacgacgatttcgtcgacaagttcgtc
gcgcggatggcggcgttacgggtcggcgacccgaccgacccggacaccgacgtgggcccg
ctggccaccgagcagggccgcaacgaggttgccaagcaagtcgaggatgctgccgcggcg
ggcgcggtgatccggtgcggcggaaagcgtctcgaccggccgggctggttctacccgccg
accgtgatcaccgacatctccaaggacatggctctctacaccgaggaggtcttcggtccg
gtcgcctcggtgttccgcgcggcgaacatcgacgaggccgtcgagatcgccaacgccacc
accttcgggctgggatccaacgcctggacccgcgacgagaccgagcaacgacgcttcatc
gacgacatcgtggcgggccaggtttttatcaacggcatgacggtgtcctatcccgaattg
ccgttcggcggggtcaagcgctcgggctatggccgggaactgtccgcacacgggatacgc
gagttctgcaacatcaagaccgtctggatcgcctag
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