Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_0647
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Entry
JTY_0647 CDS
T00864
Symbol
recBa
Name
(GenBank) putative exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JTY_0647 (recBa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_0647 (recBa)
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JTY_0647 (recBa)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JTY_0647 (recBa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAH24940
LinkDB
All DBs
Position
complement(723566..726259)
Genome browser
AA seq
897 aa
AA seq
DB search
MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR
ELRERVRGQIVEALGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT
THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA
LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA
LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG
GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR
LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV
VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG
LVRAAACTMFFGETAESLAAEGDALTDRVAGTLHEWADHARHRGVAAVFQAAQLAGMGRR
VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA
AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE
GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT
PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRTS
YSDLVRGSEAVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLVHAV
LETADPAAPDLAAELEAQVPGTRRGGPWTSTTRSWLPNWPERCCRCTTRRWDPPPPH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgagctgctgggcccgttgccgagggagggcaccaccaccgtgctggaa
gccagcgccggcaccggtaagacgttcgcgctggccggtctggtcacccgctatctggcc
gaaaccgccgcgacgctcgacgagatgttgttgatcacgttcaaccgtgcggccagccgg
gagttacgcgagcgagtgcgcgggcagatcgtcgaggccttgggcgcgctacaaggcgac
gcgccgccgagcggcgagctcgtcgagcacctgctgcgcggcagcgacgccgagcgcgcc
cagaagcggtcgcggctgcgtgacgcgctggccaacttcgacgcggcaaccatcgccacc
acccacgagttctgcggctcggtgttgaaatccctcggtgtggccggtgacaacgccgcc
gacgtggagctcaaggagagccttaccgacctggtcactgagatcgtggacgatcgctat
ctggcgaacttcggtcgtcaggagaccgatccggagctgacctacgccgaggcgctggcc
ctggcccttgccgtcgtcgacgacccgtgcgcccaactgcgcccgcctgatcccgagccc
ggcagcaaggcagcggtgcggctgcgctttgccgccgaggtgctcgaggaactcgagcgc
cgcaagggccggctgcgtgcgcaaggattcaacgatctgctgatccgtttggcgacagcc
ctcgaggcggccgactcgccagctcgcgatcggatgcgggaacgctggcggatcgtgctg
gtggacgagtttcaagataccgaccccatgcagtggcgggtgctcgagcgcgcgtttagc
cggcattcggcgctgatcctgatcggcgatcccaagcaggcgatctacggctttcgcggc
ggcgacatccacacctacctcaaggcggccggcaccgccgatgcccgctacacgttgggc
gtcaactggcgcagcgaccgggcgctggtcgagagcctgcagacggtgctgcgcgatgcg
accctgggtcacgccgacatcgtcgtccgcggcaccgacgcccaccacgccgggcaccgc
ctggcctcggcgccgcgcccggcgccgtttcggttgcgcgtggtcaaacggcacacgctc
gggtatgacgggaccgcccacgtcccgatcgaggcgctgcgccggcacatccccgacgac
ctggccgccgacgtcgcggcgctactggccagcggggccaccttcgccgggcggcccgtg
gtggccgcagacatcgcggtgatcgtcgagcatcacaaagacgcgcgggcgtgccggaat
gcgttggcggaggcgggcatcccggcgatctacaccggtgacaccgacgtgttcgcctcg
caggccgccaaggactggctgtgcctgctggaggcgttcgacgcgccgcagcgcagcggg
ctggtccgcgccgccgcgtgcacgatgttcttcggtgagaccgcggaatcgcttgccgcc
gagggcgatgcgctgaccgatcgggtggccggcacgttgcacgagtgggccgaccacgca
cgccatcgcggtgtggccgcggtgtttcaggccgctcagctggccgggatgggccggcgc
gtgctgagccagcgcggcggcgaacgggacctgacagacctggcgcacattgcgcagctg
ctgcacgaggccgctcatcgcgagcggctcggcctgcccgggctgcgcgattggctgcgc
cgccaggccaaggcgggtgccggcccgccggaacacaatcgccggttggacagcgacgcc
gcggcggtgcagatcatgaccgtcttcgtggccaagggactgcagtttcccatcgtgtat
ctgccgttcgccttcaaccgcaacgtccgcagcgacgacatcctgctgtatcacgacgac
ggcacccgctgcctgtacatcggcggcaaggacggcggtgctcagcggcgcaccgttgag
gggctgaaccgcgtcgaggcggcccacgacaacctccggctcacctatgtcgcgcttacc
cgcgcgcaatcgcaggtcgtcgcgtggtgggcaccgacgttcgacgaggtcaacggcggg
ttgtcgcggttgctgcgcgggcgccggcccggccagtcgcaggtaccggaccggtgtaca
ccacgcgtcaccgacgagcaggcctgggcggtgttcgcgcagtgggaggccgcgggcggg
ccgtcggtcgaggaatcggtcatcggtgctcgcagttccctcgaaaagccggtgcccgta
cccggtttcgaggttcggcactttcaccgccggatcgacaccacgtggcggcggacctcg
tactcggatctggtgcggggctcggaagccgtcaccgtcaccagcgagccggcggccggc
ggccgtgcggacgaggtggagatcgccgtcttcgccgcgcccggttccggcgccgatctg
acatcaccgctggccgcgctgccgtcgggggcgtcgttcggctcgctggtgcacgcggtg
ctcgagaccgcggacccagccgctcccgatctggctgccgaactggaagcccaggtgccc
ggcacgcgccgtggtggaccgtggacgtcgaccacgcgcagctggctcccgaactggccc
gagcgttgctgccgatgcacgacacgccgctgggacccgccgccgccgcactga
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