Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_0689
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Entry
JTY_0689 CDS
T00864
Symbol
end
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JTY_0689 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_0689 (end)
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JTY_0689 (end)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JTY_0689 (end)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAH24982
UniProt:
C1AL03
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All DBs
Position
771562..772320
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AA seq
252 aa
AA seq
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MLIGSHVSPTDPLAAAEAEGADVVQIFLGNPQSWKAPKPRDDAAALKAATLPIYVHAPYL
INLASANNRVRIPSRKILQETCAAAADIGAAAVIVHGGHVADDNDIDKGFQRWRKALDRL
ETEVPVYLENTAGGDHAMARRFDTIARLWDVIGDTGIGFCLDTCHTWAAGEALTDAVDRI
KAITGRIDLVHCNDSRDEAGSGRDRHANLGSGQIDPDLLVAAVKAAGAPVICETADQGRK
DDIAFLRERTGS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattggttcgcatgtcagcccaaccgatccgctggccgcagcggaggccgaaggc
gctgacgtagtgcagattttccttggcaatccgcagagctggaaggctcccaagccgcgg
gacgacgccgccgcgctgaaagccgcgaccctgcccatctacgtgcatgcgccctacctg
atcaaccttgcgtcggcgaacaatcgcgtgcggatcccgtcgcgcaagatcctgcaagag
acctgtgctgcggcggccgacattggcgcagcggcggtgatcgtgcacggtgggcacgtc
gccgacgacaacgacatcgacaagggcttccagcgctggcgcaaggcgctggaccggctg
gaaaccgaggttcccgtctacctggaaaacaccgccggcggcgatcacgcgatggcgcgc
cgcttcgacaccatcgcccggctctgggacgtcatcggcgacaccggaatcgggttttgc
ctggacacctgccacacctgggcggccggcgaggcgctgaccgatgccgtcgatcggatc
aaagcaattaccggccgcatcgatctggtgcactgcaacgactccagggacgaagcagga
tcgggccgtgaccgccacgccaacctcggcagcggccagattgatcctgacctgctggtg
gctgccgtcaaggcggccggcgcgccggtgatctgcgaaaccgccgaccaaggtcgcaag
gacgacatcgcgtttctgcgggaaagaaccggcagctga
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