Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_1141
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Entry
JTY_1141 CDS
T00864
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JTY_1141 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_1141 (xseA)
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JTY_1141 (xseA)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JTY_1141 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BAH25431
UniProt:
C1AMA2
LinkDB
All DBs
Position
complement(1236966..1238213)
Genome browser
AA seq
415 aa
AA seq
DB search
MTQNSAENPFPVRAVAIRVAGWIDKLGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL
TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR
RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG
PNAVGQIVEALRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPVVSAVGH
EPDNPLCDLVVDLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSREQRAVAQ
LRSRPVLADPMTMVSVRAEEVHRARSTLRRNLTLMVAAETERIGHLAARLATLGPAATLA
RGYAIVQTVAQTGPEGGSEPQVLRSVHDAPEGTKLRVRVADGALAAVSEGQTNGL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagaattcggcggagaatccgttcccggttcgcgcggtggcaatccgggtcgcg
ggctggatcgacaagctgggcgcggtctgggtggaggggcaattggcccagatcacaatg
cgcccagacgccaagacggtgttcatggtattgcgcgatcctgcggccgacatgtcgctg
accgtgacgtgttcccgcgacctggtgctgtccgcgccggtgaagctggccgaaggcgtt
caggtagtggtctgcggcaagccctcgttctacaccggacgtggcacattctccttgcgg
ctcagcgagattcgcgctgtcggcatcggcgagctgctggcacgcatcgaccggctgcgc
cggctgctggacgccgaggggctcttcgacccccgcctcaagcggccgatcccgtacctg
cccaacatgatcggtctgatcaccggccgtgcgagtgccgccgaacgtgacgttacgacg
gtggcctcggcgcgctggccagcggcacgtttcgccgtccgcaacgtcgccgtgcagggc
cccaacgccgtcggccagatcgtcgaggcgctgcgcgagctcgatcgagacccggacgtc
gacgtgatcgtgctggcccggggcggcggctccgtcgaggacctgctgccgttttctgac
gagacgttgtgccgcgcgatcgcggcctgccgtacgcccgtggtcagcgccgtcggtcac
gaacccgacaatccgctgtgcgatctggtcgtcgacctgcgcgccgccacccccaccgac
gccgccaagaaagtggttcccgataccgcagccgagcagcggctgatcgacgatctgcgc
cggcgcagcgcccaggcgttgcgcaactgggtttcccgcgagcaacgggcagtcgcgcag
ttgcgtagccgcccggtgctggccgatccgatgacgatggtcagcgtgcgcgccgaggag
gtccaccgagcccgctcgacgcttcgtcgcaacctcaccctgatggtcgccgccgagacc
gaacgcatcggtcatctggccgcacgcctggccacgctgggtccggccgccacgctcgcc
cgcggctatgccatagtgcagaccgttgctcagacgggacccgagggcggatccgaacca
caggtgctgcggtcggtccacgacgcaccggaaggcaccaagctgcgcgtgcgggttgcc
gacggagccctagcggcggtcagtgaaggacaaaccaatggtctgtga
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