Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_1292
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Entry
JTY_1292 CDS
T00864
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JTY_1292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_1292
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JTY_1292
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JTY_1292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAH25580
LinkDB
All DBs
Position
1406939..1407838
Genome browser
AA seq
299 aa
AA seq
DB search
MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTP
VAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVP
GWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALHRAGLVNSPVSVDAADGLR
ANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA
GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcggctgaatctagcgccaaaccggtatgggggccaccgaatttctgcgct
gccgcagcccggatgcaggatgttcgtgtgctcatgcatccgaagaccggccgggcgttc
aggtccccggtagagcccggttccggctggccaggtgatccggcgacaccgcagaccccg
gtggctgccgatgccgcgcaggtgtcagcgctggccgggggcgctggctcgatctgcgaa
ctcaacgcgctgatcagcgtgtgccgggcgtgtccccggctggtcagttggcgtgaggag
gtcgccgtcgtcaagcgccgtgccttcgccgaccagccctactgggggcgcccggtgccg
gggtgggggtcgaagcggccgcggttgctgatcctcgggctggcgcccgccgcgcacggg
gccaaccggaccggacgaatgttcaccggcgatcggtcgggagatcagctttatgcagca
ctgcatagggccggcctggtgaactcaccggtcagcgtcgacgccgcggacgggctgcgg
gccaaccggattcggatcaccgcaccggtgcggtgtgcgcccccgggcaactcgccgaca
ccggccgagcggctgacatgctcaccctggctaaatgcggaatggcggctggtgtccgat
cacatccgtgcgatcgtcgccctcggcgggttcgcctggcaggtcgcgttgcgcctggcg
ggcgcgtcggggacacccaagccgcggttcggccacggcgtcgttaccgagctgggagcc
ggtgtgcggctactgggctgctaccacccgagccagcagaatatgttcaccggtaggttg
actcctacgatgctcgacgacattttccgtgaggccaagaagctggccgggattgagtga
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integrated database retrieval system
