Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_2525
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Entry
JTY_2525 CDS
T00864
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JTY_2525 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbt03019
]
JTY_2525 (orn)
03009 Ribosome biogenesis [BR:
mbt03009
]
JTY_2525 (orn)
Messenger RNA biogenesis [BR:
mbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JTY_2525 (orn)
Ribosome biogenesis [BR:
mbt03009
]
Eukaryotic type
Pre-60S particles
RNases
JTY_2525 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAH26806
LinkDB
All DBs
Position
2783726..2784373
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AA seq
215 aa
AA seq
DB search
MQDELVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVA
EMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPT
LDSFLHYRMIDVSSIKELCRRWYPRIYFGQPPKGLTHRALADIHESIRELRFYRRTAFVP
QPGPSTSEIAAVVAELSDGAGAQEETDSAEAPQSG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacgaactggtgtggatcgactgcgagatgaccgggctcgatctgggttcggac
aagctgatcgagatagccgccctggtcaccgatgccgatctgaacattctcggcgacggg
gtggacgtggtgatgcacgccgacgacgccgcgctgtcgggcatgatcgacgtggtcgcc
gagatgcactcgcggtcggggctgatcgacgaggtgaaggcatccacggtcgacctagcg
accgccgaggccatggtgctcgactacatcaacgagcacgtcaagcagcccaagaccgcc
ccactggccggcaactcgatcgccaccgaccgcgcgttcatcgcccgcgacatgcccacg
ctggactcgtttctgcactaccgaatgatcgacgtcagctcgatcaaggaactgtgccgg
cgctggtatccgcggatctacttcggccagccgcccaaggggctgacgcaccgggcgctg
gccgacatccacgaatccatccgcgaactgcggttctaccgccgcaccgcgttcgtgccc
cagcccggcccttctaccagcgaaatcgcggccgtcgtcgccgagctttccgacggggcg
ggcgcgcaggaagaaacagattcggccgaggcgccccagagcggttaa
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