Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_2688
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Entry
JTY_2688 CDS
T00864
Name
(GenBank) hypothetical alanine rich protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbt03016
]
JTY_2688
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JTY_2688
Transfer RNA biogenesis [BR:
mbt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JTY_2688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF7696
Motif
Other DBs
NCBI-ProteinID:
BAH26969
LinkDB
All DBs
Position
2943197..2944513
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AA seq
438 aa
AA seq
DB search
MCPEPSHAGAAESEGTESEPTPLLRPAGGIPDLCVTVGEIAAAAELLDRGRGPFAVDAER
ASGFRYSGRAYLIQIRRAEAGTVLIDPVSHGGDPLTVLAPVAEVLSTNEWILHSADQDLP
CLAEVGMRPPALYDTELAGRLAGFDRVNLAAMVERLLGLGLTKGHGAADWSKRPLPSAWL
NYAALDVELLIELRAVISRVLAEQGKTDWAAQEFEHLRSFESRPPPAAARQDRWRRTSGI
HKVHDRRGLAAVRELWTARDRIAQRRDIAPRRILPDSAIIDAAIADPKSVDDLVALPVFG
GRNQRRSAAVWWAALAAARESPDPPEIAEPANGPPPPGRWVRRKPAAAARLDAARAALTE
VSQRVRVPTENLVSPDLVRRLCWEWEDISQSSPDPIAAVEAYLRTGQARAWQLELVVPIL
TAALTGAPDAGAQGDDGS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgccccgagccgtctcacgcgggagctgctgagtccgaaggcacggaatcggaaccc
acccccttgctccggcccgccggtgggataccggatctgtgtgtgaccgtcggtgaaatc
gccgctgccgcagaactactggaccgcgggcgcggaccgttcgcggtagacgccgagcgg
gcgtcgggtttccgctactccggccgcgcctacctgattcagatccggcgggccgaggcc
ggcaccgtactgatcgacccggtcagccacggcggtgacccgttgaccgtgctggcgccg
gtcgccgaggtgctcagcaccaacgagtggatcctgcactccgccgatcaggatctgccc
tgtctcgccgaggtcggtatgcgaccgccagcgctatacgacaccgagcttgccgggcgc
ctggccgggttcgatcgagtgaacctggcggccatggtcgagcggttacttggactggga
ttgaccaagggccacggcgcggccgactggtccaagcgcccgctaccctcggcctggctg
aactacgcggcgttggacgtggaactgctcatcgaactacgcgcggtgatctcgcgggtg
ctggccgagcaaggcaaaaccgattgggctgcgcaggaattcgagcacctgcggtcgttc
gaatcaaggccacccccagcggccgcccggcaggaccgctggcgacgaacctcgggtatc
cacaaagtgcatgaccggcgggggctggccgcggtccgcgaattgtggacagcgcgtgac
cgaatcgcccagcgccgcgacatcgcgccccgccggatcttgccggactcggccattatc
gatgccgccatcgccgacccaaagtcagtcgacgaccttgtcgcgttaccggtgttcggc
ggacgcaaccaacgtcgcagcgcggctgtgtggtgggcggcactggcagccgcacgcgaa
agcccagatccgccggagatcgccgaaccggcaaacgggccgccgccgccggggcggtgg
gtcagacggaaaccggcagccgccgcacggctggatgcggcgcgcgcggcgctgacggag
gtgtcgcaacgggtgcgggtaccgaccgagaacctggtctcacctgatctggtgcgacgg
ctgtgttgggaatgggaggacatctcgcagagttctccagacccgattgccgctgtcgag
gcgtacctgcgcaccggccaggcacgggcctggcagctcgaactagtggtccccatcctg
accgcggcgttgacaggggctccggacgccggcgcccagggcgatgatggctcttag
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