Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_2733
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Entry
JTY_2733 CDS
T00864
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt00300
Lysine biosynthesis
mbt00470
D-Amino acid metabolism
mbt01100
Metabolic pathways
mbt01110
Biosynthesis of secondary metabolites
mbt01120
Microbial metabolism in diverse environments
mbt01230
Biosynthesis of amino acids
Module
mbt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JTY_2733 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JTY_2733 (dapF)
Enzymes [BR:
mbt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JTY_2733 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4231
Motif
Other DBs
NCBI-ProteinID:
BAH27014
UniProt:
C1AFI5
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All DBs
Position
complement(2985389..2986258)
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AA seq
289 aa
AA seq
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MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL
DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV
TCHHVEAAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDGLAA
LDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAA
VGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAMG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgcgaagggccacggtacccagaacgacttcgtgttgctgcctgacgtcgac
gccgagttggtgctcaccgctgcccgggtggcggcattgtgcgaccggcggaaggggctg
ggcgccgacggggtgttgcgggttacgaccgccggagccgcccaggcggtaggagtgctg
gacagcctgcccgagggtgtccgcgtgaccgactggtacatggattaccgcaacgccgac
gggtcggcagcccagatgtgcggcaacggtgtgcgagtgttcgcgcactacttgcgtgcc
agtggcctggaggttcgcgacgagttcgtcgtagggtcactggccggaccgcgaccagtc
acctgccaccacgtcgaggcggcctacgccgacgtctccgtcgacatgggcaaggccaac
agattgggcgcaggggaggctgttgttggtggcaggcggtttcacggcctggccgtcgat
gtgggtaacccgcatctggcgtgcgtggattcccagctgaccgtcgacggcctggcggca
ttggacgtgggtgcgccggtgagtttcgatggtgcgcagttccccgacggggtcaatgtc
gaggtactcaccgcgccggtcgacggggcggtctggatgcgggttcacgaacgcggcgtg
ggggaaacccgctcgtgtggcaccgggacggttgcggccgcggtcgccgcgttggcggcg
gtgggctcgccgaccggaacgctcaccgtgcacgtgccgggcggagaggtcgtggttacc
gtcaccgatgccaccagcttcctgcgtgggccgtcagtgttggtggcccgcggagatctc
gctgacgattggtggaacgcgatggggtga
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