Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3002
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Entry
JTY_3002 CDS
T00864
Symbol
hupB
Name
(GenBank) putative DNA-binding protein HU homolog
KO
K03530
DNA-binding protein HU-beta
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbt03032
]
JTY_3002 (hupB)
03036 Chromosome and associated proteins [BR:
mbt03036
]
JTY_3002 (hupB)
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_3002 (hupB)
DNA replication proteins [BR:
mbt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JTY_3002 (hupB)
Chromosome and associated proteins [BR:
mbt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JTY_3002 (hupB)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JTY_3002 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAH27280
LinkDB
All DBs
Position
complement(3290340..3290957)
Genome browser
AA seq
205 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPA
KKATKAAKKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKASVRKAATKAP
AKKAAAKRPATKAPAKKATARRGRK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtcggcag
gcgaccgccgccgtcgagaatgtcgttgacacgattgtgcgtgcggtacacaaaggcgac
agcgtcaccattaccgggttcggtgtgttcgaacagcgtcgccgcgcggctcgagtggcc
cgcaatccgcgtaccggcgagacagtaaaggtgaagccgacgtcggtgccggcgttccgc
ccgggcgcgcaattcaaagcggttgtgtctggcgcgcagcgtctcccggcagaaggaccc
gctgttaagcgtggtgtgggggccagtgcagccaagaaggtagcgaagaaggcacctgcc
aagaaggcgacaaaggccgccaagaaggcggcgaccaaggcgcccgccaagaaagcggcg
accaaggcgcccgccaagaaagctgtcaaggccacgaagtcacccgccaagaaggtgacc
aaggcggtgaagaagaccgcggtcaaggcatcggtgcgtaaggcggcgaccaaggcgccg
gcaaagaaggcagcggccaagcggccggctaccaaggctcccgccaagaaggcaaccgct
cggcggggtcgcaaatag
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