Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3102
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Entry
JTY_3102 CDS
T00864
Symbol
virS
Name
(GenBank) virulence-regulating transcriptional regulator
KO
K28158
AraC family transcriptional regulator, mymA operon recgulator
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbt03000
]
JTY_3102 (virS)
Transcription factors [BR:
mbt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JTY_3102 (virS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_23
HTH_AraC
HTH_30
HTH_20
HTH_8
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BAH27380
LinkDB
All DBs
Position
complement(3394540..3395562)
Genome browser
AA seq
340 aa
AA seq
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MELGSLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASA
AELDCPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVSSTT
ARSNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAY
REALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVG
LARRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLY
LSQIAVLLGYSEQSALNRSCRCWFGMTPRQYRAYGGVSGR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggcagcctcatccgcgccaccaacctgtgggggtacaccgacctgatgcgc
gagctcggcgcggacccgctgccgtttctgcggcgcttcgacatcccgccgggcatcgaa
caccaagaggacgcgttcatgtcgctggccgggttcgtgcgcatgctggaggccagcgcc
gccgagctcgattgcccggacttcggactacgccttgcacgctggcagggcctgggcatt
ctcggcccggtagcggtgatcgcgcgcaacgctgccaccttgttcggcgggctggaggcg
atcggtcgctacctctacgtccattcgcccgccctgacgctgacggtttcatcaactacc
gcacggtccaacgtccggttcggctatgaggtgaccgaaccggggattccctatccgctg
cagggatacgagctgagcatggccaacgccgcccggatgatccgcctgctgggcggaccg
caggcgcgggcgcgcgttttctcgttccgacatgcgcaactgggcaccgacgccgcctac
cgcgaagcgttgggttgtaccgttcggttcggccggacatggtgcgggttcgaggtggac
caccggctcgccggtaggcccatcgaccatgcggatccggaaaccaagcgcatcgccacg
aaatatttggaatcccaataccttccgagcgatgccacgctctccgagcgggtcgtcggg
ttggcccgccgcctgctgccgaccggccaatgcagcgccgaggccatcgccgaccaactc
gacatgcacccacgaacgctgcagcggcgcttggctgccgagggcctccggtgccatgac
ctcatcgagcgcgaacgccgtgcgcaagcggcaaggtacctcgcccaaccggggttgtat
ctgagccaaatcgcggtgctgctcggctattccgagcagagcgcgctcaaccggtcgtgc
cggtgctggtttgggatgacaccccggcagtatcgagcctatggtggggtcagcggtcgg
tga
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