Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3847
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Entry
JTY_3847 CDS
T00864
Symbol
rfbD
Name
(GenBank) putative O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JTY_3847 (rfbD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbt02000
]
JTY_3847 (rfbD)
Transporters [BR:
mbt02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
JTY_3847 (rfbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
Motif
Other DBs
NCBI-ProteinID:
BAH28117
LinkDB
All DBs
Position
4198854..4199696
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AA seq
280 aa
AA seq
DB search
MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT
GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP
LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG
ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP
LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacattcatggatgctcaagctagcttccagacacagtcgcggacactggcccgcgtc
cgaggcgatctggtcgacgggttccgccgccacgagctgtggctgcacctgggctggcag
gacatcaagcagcggtaccgccgctcggtgctggggccgttctggatcaccatcgccacc
ggaacgaccgccgtcgcgatgggcggcctgtactccaagctgtttcggctcgagctgtct
gagcacctgccctacgtcacgctcgggctgatcgtctggaacctgatcaacgccgccatc
ctggacggcgcagaggttttcgtcgccaacgaaggtctgatcaaacagctgccggcaccg
ttgagcgtgcacgtctatcggttggtgtggcggcagatgatcttcttcgcccacaacatc
gtcatctacttcgtcatcgcgatcatctttcctaagccgtggtcgtgggcggatctgtcg
tttcttccggcgctggcgctcattttcctcaattgcgtttgggtgtcactgtgtttcggc
atcctggcgacccgctaccgcgacatcggcccgctgctgttttccgttgtgcagttgttg
ttcttcatgacgccgatcatctggaacgacgagaccctgcgtcggcagggcgcgggccgc
tggtcgagcatcgtcgagctcaacccgctgctgcactatctggacatcgtgcgggcgcca
ctgttgggcgctcaccaggagctgcggcactggctggtggtgctggtgttgaccgtcgtc
ggctggatgctggcggcgttcgcgatgcggcagtatcgcgcgcgggtgccctactgggtg
tag
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