Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3966
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Entry
JTY_3966 CDS
T00864
Symbol
pcnA
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JTY_3966 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbt03019
]
JTY_3966 (pcnA)
Enzymes [BR:
mbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JTY_3966 (pcnA)
Messenger RNA biogenesis [BR:
mbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JTY_3966 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
AbiEii
Motif
Other DBs
NCBI-ProteinID:
BAH28235
LinkDB
All DBs
Position
complement(4351811..4353253)
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AA seq
480 aa
AA seq
DB search
MPEAVQEADLLTAAAVALNRHAALLRELGSVFAAAGHELYLVGGSVRDALLGRLSPDLDF
TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSDHRMEITTFRADSYDRVSRHPEVRF
GDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPL
RMLRAARFVSQLGFAVAPRVRAAIEEMAPQLARISAERVAAELDKLLVGEDPAAGIDLMV
QSGMGAVVLPEIGGMRMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDI
GKPATRRHEPDGGVSFHHHEVVGAKMVRKRMRALKYSKQMIDDISQLVYLHLRFHGYGDG
KWTDSAVRRYVTDAGALLPRLHKLVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDL
DRVRPDLDGNQIMAVLDIPAGPQVGEAWRYLKELRLERGPLSTEEATTELLSWWKSRGNR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaagccgtccaggaagccgatctgctaaccgccgctgcggttgccttgaacagg
catgctgccttattgcgggaactcgggtcggtgttcgccgccgcgggacacgagttgtat
ctggtcggcggttcggtgcgagatgcactgttgggccggttgagccccgacctggacttc
accaccgacgcccgtcccgagcgggtgcaggagatcgtgcggccgtgggccgatgcggtg
tgggataccggaatcgaattcggcaccgtcggcgtgggtaagagcgaccaccgcatggag
atcaccacattccgtgccgacagctacgaccgggtttcgcgtcatccagaggtacgtttc
ggcgattgcctcgagggcgatctggtccgccgcgacttcaccacgaacgcaatggctgtg
cgcgtcaccgccactgggccgggcgaattcctggatccgcttggtggcttggcggcgctg
cgggccaaggtgttagacaccccggcggcgccgtcggggtcctttggcgacgatccgttg
cggatgctgcgcgccgcgcggttcgtctcgcaacttggattcgcggtggcgccgcgggtg
cgcgcggcgatcgaagagatggcgccgcagttggcccgaatcagcgccgaacgggtggcc
gccgagctggacaagctgctggtcggtgaggatccggccgcgggtatcgacctgatggtg
cagagcggtatgggtgctgtggtcttgcctgaaatcggtgggatgcggatggcgatcgac
gaacatcaccagcacaaggacgtctatcagcattccttgaccgtgctgcggcaggcgatc
gcgctggaggacgacggcccggatctggtgttgcgctgggcggcgctgctgcacgacatc
ggcaagcccgccacccgccgtcacgaacccgacggtggggtgagcttccatcaccacgaa
gtggtcggcgccaagatggtgcgcaagcggatgcgggcgctgaagtattccaagcagatg
atcgacgacatctcgcagctggtctacctgcatctgcggtttcacggctacggcgatggg
aaatggaccgactctgcggtgcgccgctatgtcaccgacgccggggccctactgccacgg
ctgcacaagctggtgcgcgccgactgcacgacccgcaacaagcgccgggccgcgcggttg
caggccagttacgaccggctggaagagcggatcgcggagctggccgcccaggaggatctg
gatcgggtgcgccccgacctggacggcaaccagatcatggcggtgctcgacattccggcg
ggcccgcaagtcggcgaggcgtggcgctacttgaaggagctgcggctagagcgcggcccg
ttgtccaccgaggaggcgacaaccgagctgctgtcctggtggaaatcacgggggaaccgc
tag
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