Methanococcoides burtonii: Mbur_0028
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Entry
Mbur_0028 CDS
T00341
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mbu
Methanococcoides burtonii
Brite
KEGG Orthology (KO) [BR:
mbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbu03016
]
Mbur_0028 (truB)
Enzymes [BR:
mbu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mbur_0028 (truB)
Transfer RNA biogenesis [BR:
mbu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mbur_0028 (truB)
Prokaryotic type
Mbur_0028 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
ABE51052
UniProt:
Q12ZS4
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All DBs
Position
15375..16370
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AA seq
331 aa
AA seq
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MVSSKRSPKDVNIMVEKFHATTNAAYGCLPQDRPILEYINMGVVNIDKAIGPTSHEVTAW
VRDMLGVKKAGHSGSLDPHVTGLLPVMLGRATKAVSALRLSGKEYICVMHLHDDIPDRKI
RKACKEFTGPIYQTPPIISAVKRQLRIRNIYYLDVLEIEGREVLMRVGCEAGTYLRKLCH
DIGLVLGCGGHMKQLRRTGTGPFREDTLVSLYDLKDACVFWQEDGDESELRKLVRPMEEG
LSHLPKIIIRDSAVDAVCRGASLAVPGIVSFSKCIQKDDKIAVFTLKGEAVALCRSFMNA
DELENESHGIACITERVIMDAAIYPRCWKAK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtttcatctaaacgttctcccaaagatgttaatattatggtggaaaaatttcacgca
actaccaatgcagcatatggttgtcttcctcaggaccgaccgatccttgagtatattaat
atgggtgttgtgaacatcgataaggcaataggcccaaccagtcacgaggtcacagcatgg
gtaagggatatgctcggtgtgaaaaaagcaggacattccggatcacttgatccgcatgta
actggtctgcttcccgtgatgcttggcagggcaacaaaagcggtctcagctctgcgtctt
tccggaaaagagtacatttgtgttatgcatttgcatgatgacatccctgataggaagatc
cgaaaagcatgcaaggaattcacaggtcctatctaccagacccctccaattatctctgct
gtcaaaaggcaattgaggatcaggaacatctattatctggatgtccttgagatcgaaggt
agggaagtgctcatgagagtgggttgtgaggcagggacatatcttcgcaaactctgtcat
gacatcggccttgtccttggttgtggcggtcacatgaagcagcttcgaagaaccggaacg
ggtccgttcagggaggatacgcttgtatcactatatgacctcaaggatgcatgcgtgttc
tggcaggaagatggcgatgagtctgaactacgcaaattggtacgtccaatggaagaaggt
ctgtcccatctgccgaagatcatcattcgtgatagtgctgtagatgctgtttgcaggggt
gcttcccttgcagttcccggtatcgtttcattcagtaaatgcatccaaaaagatgacaaa
attgccgttttcactctaaaaggagaagctgtggcactttgcaggtcattcatgaatgca
gatgaacttgaaaatgaaagtcacggcatagcctgtattaccgaaagggtaataatggat
gccgctatttatccaaggtgctggaaggcgaaataa
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