Methanococcoides burtonii: Mbur_1040
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Entry
Mbur_1040 CDS
T00341
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mbu
Methanococcoides burtonii
Brite
KEGG Orthology (KO) [BR:
mbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbu03016
]
Mbur_1040 (endA)
Enzymes [BR:
mbu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Mbur_1040 (endA)
Transfer RNA biogenesis [BR:
mbu03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Mbur_1040 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
ABE51975
UniProt:
Q12X51
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All DBs
Position
1122657..1123712
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AA seq
351 aa
AA seq
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MRAEIVKDRVLVEKKAINEFYNNGYYGRPKSSGLELTLIEAVYLAFRGKIEVEHEGKVLE
FSDLFKEASILQPSFELKYIVYKDLRERGFYVQPGVTDFRVYPRGSHPGKGAAKQFIYVR
SERAPMPLRDLLRSLAAAENVRKQMVLAIVDEESDITFYDVKRPRLKGEMKEPLYPDINA
DATFLEDRVVVWDEEASKTLFENGFYGKPLDSQRLQLSLVESRYLLEKGVLNINNRQDES
MDVDAFSKMASEIEPEFNLKSSVYTDLRDKGVVPKTGFKFGSHFRVYSQVESPTKIPHSE
YLIHSIPMDHEFTLPVMSRAIRLANSVRKRMLYAILTDDGVDYIDIGRLKM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagagatagtaaaggaccgtgtacttgtagaaaaaaaagctattaatgagttt
tacaataatgggtactacggcaggcctaaatcgagcgggcttgagctcacacttatcgaa
gctgtatatctggcattccgcgggaagatagaggtggaacatgaaggaaaggtcctggag
ttttccgatcttttcaaggaagcttccatcttgcagccctccttcgagcttaaatatatc
gtttacaaggacctgagagaacgagggttctacgtacaacccggtgtgaccgatttccgc
gtatacccacgtggcagccatcccggaaagggagcggcaaagcagttcatctatgtaagg
tcagaaagagcaccaatgccactgagggacctcttgcgttcccttgcagcagccgaaaac
gttagaaagcagatggtactcgccattgtagatgaagagagtgacattactttctacgat
gtgaaaaggccacgcttaaaaggcgagatgaaggaacccctttacccagacatcaatgca
gatgccactttccttgaggacagggttgtcgtatgggatgaggaagcttcgaaaaccctt
tttgagaatggcttttacgggaaaccattggatagccagagattgcagctttcacttgtt
gagtcccgatatctccttgagaagggtgtcctcaatatcaacaacagacaggatgaatcc
atggatgtggatgctttttcaaagatggcttcggagattgaacccgagttcaatctgaag
agcagtgtttacacagatcttcgagataaaggggtcgtaccaaagacaggtttcaagttc
ggtagtcatttccgtgtttattcacaggtggaatcaccaacaaagataccgcattccgaa
tatctcatacattcgataccaatggaccatgaatttacactccctgtcatgtcaagggcc
ataaggcttgccaacagtgtaagaaagaggatgctttatgcgatcctcacagatgatggt
gtcgattacatcgatattggcagattaaagatgtga
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